RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 DRICH1Q6PGQ1 229 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 RAPH1Q70E73 1250 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 DPP9Q86TI2 863 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 OSMRQ99650 979 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ZNF358Q9NW07 568 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 EURLQ9NYK6 297 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 DONSONQ9NYP3 566 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 PCDHGC3Q9UN70 934 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 AP4E1Q9UPM8 1137 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 TIMM13Q9Y5L4 95 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 MAP3K7O43318 606 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 BOLA3Q53S33 107 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 FAM47CQ5HY64 1035 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 C4orf50Q6ZRC1 276 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 DCLRE1BQ9H816 532 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 LUC7L3O95232 432 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 N4BP2L1Q5TBK1 243 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 TLDC1Q6P9B6 456 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 ARHGAP24Q8N264 748 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 CMASQ8NFW8 434 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 ZFATQ9P243 1243 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 TUBGCP4Q9UGJ1 667 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 THSD7AQ9UPZ6 1657 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 B4GALT4O60513 344 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 IL18RAPO95256 599 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 MSX2P35548 267 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 FASTKD1Q53R41 847 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 CTU1Q7Z7A3 348 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 CMC1Q7Z7K0 106 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 AZIN2Q96A70 460 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 MTBPQ96DY7 904 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 SCYL1Q96KG9 808 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 NRXN2Q9P2S2 1712 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 CLDN5O00501 218 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 APOEP02649 317 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 CYP3A5P20815 502 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 SULT1E1P49888 294 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 SARNPP82979 210 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 TSHZ1Q6ZSZ6 1077 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 SDCCAG8Q86SQ7 713 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 WDR75Q8IWA0 830 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 RNF148Q8N7C7 305 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 PYDC1Q8WXC3 89 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 CDKL2Q92772 493 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 INPP5DQ92835 1189 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 CNTN6Q9UQ52 1028 aa13.1□□□□□ -0.31
PPP4R1-202ENST00000400555 DPPA5A6NC42 116 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 C2CD4BA6NLJ0 364 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ATG7O95352 703 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 RARBP10826 455 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 SKIP12755 728 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 GLRBP48167 497 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 KLC1Q07866 573 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ILDR2Q71H61 639 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 RBM15BQ8NDT2 890 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 LRRC4Q9HBW1 653 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 APOBEC2Q9Y235 224 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 CCDC160A6NGH7 325 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 OPHN1O60890 802 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 C6orf222P0C671 652 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ADORA2AP29274 412 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 CCNHP51946 323 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 RIOX2Q8IUF8 465 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 CCDC185Q8N715 623 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 COLGALT1Q8NBJ5 622 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 WWP1Q9H0M0 922 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 NRDE2Q9H7Z3 1164 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 CITO14578 2027 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 E9PBE3 544 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 PAPSS1O43252 624 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 KLHL41O60662 606 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 STK10O94804 968 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 TGFB3P10600 412 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 LMO2P25791 158 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ICAM3P32942 547 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ABL2P42684 1182 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 TNFAIP2Q03169 654 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ITGA9Q13797 1035 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 ZNF618Q5T7W0 954 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 RASSF3Q86WH2 238 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 TTC30AQ86WT1 665 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 TMEM174Q8WUU8 243 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 LHX5Q9H2C1 402 aa13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 PIN4Q9Y237 131 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-202ENST00000400555 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms