RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 SMAD4Q13485 552 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 KCTD11Q693B1 232 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SETD3Q86TU7 594 aaPredicted RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 HOOK3Q86VS8 718 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 GAD1Q99259 594 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 PBX4Q9BYU1 374 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 DCLK3Q9C098 648 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 RASSF4Q9H2L5 321 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 NSUN3Q9H649 340 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 HESX1Q9UBX0 185 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 G3BP2Q9UN86 482 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 PAXBP1Q9Y5B6 917 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 PCDHB12Q9Y5F1 795 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CCDC188H7C350 402 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CLIC2O15247 247 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 C1QAP02745 245 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CDC25CP30307 473 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 GNA15P30679 374 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 RPL26P61254 145 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CACNB1Q02641 598 aaPredicted RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 ARID5AQ03989 594 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CCDC14Q49A88 953 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 ZNF658BQ4V348 819 aaPredicted RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 PABPC1LQ4VXU2 614 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 BOLA3Q53S33 107 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SLC47A2Q86VL8 602 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CREG2Q8IUH2 290 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 NUP93Q8N1F7 819 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 HDAC11Q96DB2 347 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CFAP36Q96G28 342 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 EMILIN2Q9BXX0 1053 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SLITRK6Q9H5Y7 841 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 POPDC2Q9HBU9 364 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 HMGXB4Q9UGU5 601 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 DNAI1Q9UI46 699 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 RPL26L1Q9UNX3 145 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 INSL5Q9Y5Q6 135 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 ZNF840PA6NDX5 716 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 EIF3HO15372 352 aaKnown RBP eCLIP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 WISP3O95389 354 aaPredicted RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 TRUB2O95900 331 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SYN1P17600 705 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 KRT9P35527 623 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 LTBRP36941 435 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 KLK7P49862 253 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CDR1P51861 262 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SLC18A1P54219 525 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 ROR1Q01973 937 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 DCAF12L1Q5VU92 463 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 EGFL6Q8IUX8 553 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 STAMQ92783 540 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 TMEM169Q96HH4 297 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 ADAM33Q9BZ11 813 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 PPCSQ9HAB8 311 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 EURLQ9NYK6 297 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 IGSF9Q9P2J2 1179 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 DNAJB4Q9UDY4 337 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SALL4Q9UJQ4 1053 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SNX12Q9UMY4 172 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 AGAP1Q9UPQ3 857 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 FAN1Q9Y2M0 1017 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CCDC163A0A0D9SF12 145 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 SLC38A8A6NNN8 435 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 HUS1O60921 280 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 PHACTR2O75167 634 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CISD3P0C7P0 127 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 MLNP12872 115 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 ATP2A2P16615 1042 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CR2P20023 1033 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 KLRC2P26717 231 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 FLT3P36888 993 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CDKN2BP42772 138 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CYP2J2P51589 502 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 AFF1P51825 1210 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 ETF1P62495 437 aaKnown RBP3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 STEAP4Q687X5 459 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 OVOS1Q6IE37 1185 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 DENND1BQ6P3S1 775 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 VPS36Q86VN1 386 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 METTL23Q86XA0 190 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 RCOR2Q8IZ40 523 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 RNF214Q8ND24 703 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 MCUQ8NE86 351 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 DEPDC1BQ8WUY9 529 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CHFRQ96EP1 664 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 CPXM1Q96SM3 734 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 VAT1Q99536 393 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 IL12RB2Q99665 862 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 KLHL42Q9P2K6 505 aa3.82□□□□□ -1.8
FNDC3A-202ENST00000398316 A0A1W2PQ67 120 aa3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 GCATO75600 419 aa3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 ZMPSTE24O75844 475 aa3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 ZFXP17010 805 aaPredicted RBP3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 TCP1P17987 556 aaKnown RBP3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 IVDP26440 423 aa3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 RFC1P35251 1148 aaPredicted RBP3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 HSPA9P38646 679 aaKnown RBP3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 EIF4A3P38919 411 aaKnown RBP3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 TNNC1P63316 161 aa3.81□□□□□ -1.8
FNDC3A-202ENST00000398316 RAPGEF1Q13905 1077 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms