RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 IFI44Q8TCB0 444 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 NCSTNQ92542 709 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 STAMQ92783 540 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 HOXB13Q92826 284 aaPredicted RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 TMX3Q96JJ7 454 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 CLIC6Q96NY7 704 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 GBP5Q96PP8 586 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 THUMPD3Q9BV44 507 aaKnown RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 C1orf43Q9BWL3 253 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ZNF518BQ9C0D4 1074 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 RANBP17Q9H2T7 1088 aaKnown RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 MTG2Q9H4K7 406 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 HEYLQ9NQ87 328 aaPredicted RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SNX15Q9NRS6 342 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 NDUFAF4Q9P032 175 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 CALCOCO1Q9P1Z2 691 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ZNF624Q9P2J8 865 aaPredicted RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 CTNNA3Q9UI47 895 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 MID2Q9UJV3 735 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 CORO1CQ9ULV4 474 aaPredicted RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 MBD3L4A6NDZ8 208 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 MBD3L3A6NE82 208 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 NPIPB15A6NHN6 443 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 C9orf118A6NHY6 69 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 TMEM233B4DJY2 109 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ASAP2O43150 1006 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 HNRNPRO43390 633 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PRPSAP2O60256 369 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ENTPD3O75355 529 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 FTH1P19P0C7X4 201 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 KLRK1P26718 216 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 GPC3P51654 580 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CTBP1Q13363 440 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 RAB32Q13637 225 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SLC44A4Q53GD3 710 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 BTBD8Q5XKL5 378 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ANO7Q6IWH7 933 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 KLHL10Q6JEL2 608 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CAVIN1Q6NZI2 390 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 INO80CQ6PI98 192 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SLC30A9Q6PML9 568 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 GADL1Q6ZQY3 521 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SYT13Q7L8C5 426 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 KRT28Q7Z3Y7 464 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 RSPH3Q86UC2 560 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 METTL23Q86XA0 190 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 FAM90A1Q86YD7 464 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ANKRD35Q8N283 1001 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 AOPEPQ8N6M6 819 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 C10orf53Q8N6V4 93 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CDYL2Q8N8U2 506 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 TDRD5Q8NAT2 981 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 HIPK4Q8NE63 616 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 GABPB2Q8TAK5 448 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SCFD2Q8WU76 684 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SIPA1Q96FS4 1042 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ABHD1Q96SE0 405 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CDK5RAP1Q96SZ6 601 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 NTPCRQ9BSD7 190 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 APOL6Q9BWW8 343 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 MAK16Q9BXY0 300 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 FUT8Q9BYC5 575 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 BRD8Q9H0E9 1235 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 TMEM168Q9H0V1 697 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 IL21RQ9HBE5 538 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SNTG1Q9NSN8 517 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SELENONQ9NZV5 590 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 MRPL15Q9P015 296 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CPSF2Q9P2I0 782 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CACNG4Q9UBN1 327 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 TRIM17Q9Y577 477 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ANGPTL3Q9Y5C1 460 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 AP1M2Q9Y6Q5 423 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 TP73O15350 636 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ZBTB43O43298 467 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SUV39H1O43463 412 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CAMTA2O94983 1202 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SNX4O95219 450 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 DLDP09622 509 aaKnown RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CKBP12277 381 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CPA1P15085 419 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PTPN2P17706 415 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PBLDP30039 288 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 RFC1P35251 1148 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-204ENST00000396464 RGS3P49796 1198 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 EPHA5P54756 1037 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 MYO1EQ12965 1108 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 TDGQ13569 410 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 SLC5A9Q2M3M2 681 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 KRBOX4Q5JUW0 171 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PLEKHS1Q5SXH7 462 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 FAXCQ5TGI0 409 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 EMC10Q5UCC4 262 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PET117Q6UWS5 81 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 OTUD6AQ7L8S5 288 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 PLPPR4Q7Z2D5 763 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 CCDC28AQ8IWP9 274 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 ULK2Q8IYT8 1036 aa5.31□□□□□ -1.56
GABPB1-204ENST00000396464 RNF168Q8IYW5 571 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms