RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 C4BPBP20851 252 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 CDC25CP30307 473 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 SNX17Q15036 470 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 LRRC55Q6ZSA7 311 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 WDR49Q8IV35 697 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 FAM172AQ8WUF8 416 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 DCUN1D1Q96GG9 259 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 PLEKHA8Q96JA3 519 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 ZDHHC15Q96MV8 337 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 CYP3A43Q9HB55 503 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 CFAP99D6REC4 459 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 NR5A2O00482 541 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 ALDH1A1P00352 501 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 DCAF4L1Q3SXM0 396 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 FUT11Q495W5 492 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 NOTUMQ6P988 496 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 EXOC3L1Q86VI1 746 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 C4orf19Q8IY42 314 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 DCUN1D5Q9BTE7 237 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 RMND5AQ9H871 391 aa17.68■□□□□ 0.42
SIN3A-203ENST00000394949 REXO2Q9Y3B8 237 aaKnown RBP17.68■□□□□ 0.42
SIN3A-203ENST00000394949 RGS5O15539 181 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ENTPD5O75356 428 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ATXN8OSP0DMR3 200 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 TP53BP2Q13625 1128 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 POU5F2Q8N7G0 328 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 SH3KBP1Q96B97 665 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 NUDT12Q9BQG2 462 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 STN1Q9H668 368 aaKnown RBP17.67■□□□□ 0.42
SIN3A-203ENST00000394949 PCDHB8Q9UN66 801 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ANKRD6Q9Y2G4 727 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 DYTNA2CJ06 578 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 NCAM2O15394 837 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 LDLRP01130 860 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 CDRT15Q96T59 188 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 GRIP2Q9C0E4 1043 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 COMMD8Q9NX08 183 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 DNPEPQ9ULA0 475 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.67■□□□□ 0.42
SIN3A-203ENST00000394949 DEPDC5O75140 1603 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 F9P00740 461 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ITGB3P05106 788 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ANPEPP15144 967 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ALDH1A3P47895 512 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 PDK3Q15120 406 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 MFSD7Q6UXD7 560 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ARHGEF19Q8IW93 802 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 LRRC71Q8N4P6 559 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 DHRSXQ8N5I4 330 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 CPNE1Q99829 537 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 VWA5AO00534 786 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 PGAM1P18669 254 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 GNL1P36915 607 aaPredicted RBP17.67■□□□□ 0.42
SIN3A-203ENST00000394949 ACAP1Q15027 740 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 FAM98BQ52LJ0 330 aaKnown RBP17.67■□□□□ 0.42
SIN3A-203ENST00000394949 PRAMEF18Q5VWM3 479 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 PLEKHM3Q6ZWE6 761 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 SAMD7Q7Z3H4 446 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 KCTD14Q9BQ13 255 aaPredicted RBP17.67■□□□□ 0.42
SIN3A-203ENST00000394949 PLGRKTQ9HBL7 147 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 CHST12Q9NRB3 414 aa17.67■□□□□ 0.42
SIN3A-203ENST00000394949 KRT36O76013 467 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 GLRBP48167 497 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 ZNF268Q14587 947 aaPredicted RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 ATP6AP1LQ52LC2 224 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 PTRHD1Q6GMV3 140 aaKnown RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 SNX32Q86XE0 403 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 PIWIL2Q8TC59 973 aaKnown RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 PYDC1Q8WXC3 89 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 SLC25A23Q9BV35 468 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 CISHQ9NSE2 258 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 FBXO28Q9NVF7 368 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 MED26O95402 600 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 CASP7P55210 303 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 DGUOKQ16854 277 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 THEMIS2Q5TEJ8 643 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 TRPC4APQ8TEL6 797 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 DIS3LQ8TF46 1054 aaKnown RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 GMCL1Q96IK5 515 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 AP4E1Q9UPM8 1137 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 PDZK1P1A8MUH7 402 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 CNOT3O75175 753 aaKnown RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 ATP6V1B2P21281 511 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 AVPR1AP37288 418 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 GNASQ5JWF2 1037 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 PRELID2Q8N945 189 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 GPRC5CQ9NQ84 441 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 PNMA8CA0A1B0GUJ8 204 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 MAP3K13O43283 966 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 DCXO43602 365 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 SPANXN3Q5MJ09 141 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.66■□□□□ 0.425e-6■■■■■ 45.5
SIN3A-203ENST00000394949 NSMCE2Q96MF7 247 aa17.66■□□□□ 0.42
SIN3A-203ENST00000394949 H2AFY2Q9P0M6 372 aaPredicted RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 UBQLN1Q9UMX0 589 aaKnown RBP17.66■□□□□ 0.42
SIN3A-203ENST00000394949 SPDYE5A6NIY4 337 aa17.65■□□□□ 0.42
SIN3A-203ENST00000394949 SNTNA6NMZ2 147 aa17.65■□□□□ 0.42
SIN3A-203ENST00000394949 APOC4-APOC2K7ER74 178 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms