RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 KBTBD13C9JR72 458 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 SPAG7O75391 227 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 MAP3K6O95382 1288 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 RPLP2P05387 115 aaKnown RBP9.38□□□□□ -0.91
TDP1-202ENST00000393452 THP07101 528 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 RARBP10826 455 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 LHX1P48742 406 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
TDP1-202ENST00000393452 MTM1Q13496 603 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 SPARCL1Q14515 664 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 KCNT2Q6UVM3 1135 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 MRPL10Q7Z7H8 261 aaKnown RBP9.38□□□□□ -0.91
TDP1-202ENST00000393452 CAND1Q86VP6 1230 aaKnown RBP9.38□□□□□ -0.91
TDP1-202ENST00000393452 HACE1Q8IYU2 909 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 TRIB2Q92519 343 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 FAM149B1Q96BN6 582 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 MIOSQ9NXC5 875 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 DDX43Q9NXZ2 648 aaKnown RBP9.38□□□□□ -0.91
TDP1-202ENST00000393452 GIT1Q9Y2X7 761 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 USP15Q9Y4E8 981 aaPredicted RBP9.38□□□□□ -0.91
TDP1-202ENST00000393452 CAPN7Q9Y6W3 813 aa9.38□□□□□ -0.91
TDP1-202ENST00000393452 ARL5CA6NH57 179 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 AVILO75366 819 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 DGKIO75912 1065 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 PGK1P00558 417 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 FAM200BP0CF97 657 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 GOT1P17174 413 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 KRT4P19013 534 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 TPSB2P20231 275 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 AMPD1P23109 780 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 RPL9P32969 192 aaKnown RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 RPA3P35244 121 aaPredicted RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 ARL4AP40617 200 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 MSH2P43246 934 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 NDUFV1P49821 464 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SULT1E1P49888 294 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 PITX1P78337 314 aaPredicted RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 MTFR1Q15390 333 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 TPSAB1Q15661 275 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 DCAF6Q58WW2 860 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 MDH1BQ5I0G3 518 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 TRPM8Q7Z2W7 1104 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 FAM131BQ86XD5 332 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 C4orf33Q8N1A6 199 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 PYROXD2Q8N2H3 581 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 C3orf58Q8NDZ4 430 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 CCDC110Q8TBZ0 833 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 NDRG1Q92597 394 aaKnown RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 GRAMD1AQ96CP6 724 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 LRRC39Q96DD0 335 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 POPDC2Q9HBU9 364 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 LRRC4Q9HBW1 653 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 ARHGEF4Q9NR80 690 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 KRT82Q9NSB4 513 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 CACNG4Q9UBN1 327 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 PRKAG3Q9UGI9 489 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 STAP1Q9ULZ2 295 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SF3B1O75533 1304 aaKnown RBP eCLIP9.37□□□□□ -0.914e-7■■■■■ 133.7
TDP1-202ENST00000393452 HACD1B0YJ81 288 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 GPR182O15218 404 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 CA12O43570 354 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 ZNF623O75123 536 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 ADAMTS4O75173 837 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 PIAS1O75925 651 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SUN1O94901 812 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 FBXO21O94952 628 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 FYNP06241 537 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 APRTP07741 180 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 CA4P22748 312 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SCTRP47872 440 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 CLCNKBP51801 687 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 TKTL1P51854 596 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SLC20A2Q08357 652 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SREBF2Q12772 1141 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 PDK4Q16654 411 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 KBTBD12Q3ZCT8 623 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 RAB41Q5JT25 222 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SYPL2Q5VXT5 272 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 CGB2Q6NT52 195 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 ZNF534Q76KX8 674 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SPATA21Q7Z572 469 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 CNPY4Q8N129 248 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 VPS52Q8N1B4 723 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 ZMIZ2Q8NF64 920 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 ALKBH8Q96BT7 664 aaKnown RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 MRRFQ96E11 262 aaKnown RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SMOQ99835 787 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SYT15Q9BQS2 421 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 AGO3Q9H9G7 860 aaKnown RBP9.37□□□□□ -0.91
TDP1-202ENST00000393452 PLAC1Q9HBJ0 212 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 GRID1Q9ULK0 1009 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 SLC12A4Q9UP95 1085 aa9.37□□□□□ -0.91
TDP1-202ENST00000393452 COL4A4P53420 1690 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms