RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 MORF4L2Q15014 288 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 ZNF792Q3KQV3 632 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 PTPN20Q4JDL3 420 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 LDLRAD1Q5T700 205 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 SAPCD2Q86UD0 394 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 EPS8L3Q8TE67 593 aaKnown RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 UCMAQ8WVF2 138 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 HTR3CQ8WXA8 447 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 SCLYQ96I15 445 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 FGD4Q96M96 766 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 CDK5RAP1Q96SZ6 601 aaKnown RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 PLCH1Q4KWH8 1693 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 ADGRA3Q8IWK6 1321 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 KIAA0100Q14667 2235 aaKnown RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 PDE2AO00408 941 aaPredicted RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 IGFBP4P22692 258 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 RBL1P28749 1068 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 ILDR2Q71H61 639 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 DDIASQ8IXT1 998 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 TMEM192Q8IY95 271 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 HIPK4Q8NE63 616 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.52□□□□□ -0.252e-6■■■■□ 25.8
PTPRN2-202ENST00000389416 REXO2Q9Y3B8 237 aaKnown RBP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 A0A1B0GUA9 196 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 MOXD2PA6NHM9 499 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 SPTLC1O15269 473 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 TLL1O43897 1013 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 MDH1P40925 334 aaKnown RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 HADHAP40939 763 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 GEMIN4P57678 1058 aaKnown RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 ANGPTL8Q6UXH0 198 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 TPGS1Q6ZTW0 290 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 C16orf59Q7L2K0 433 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 HNRNPLLQ8WVV9 542 aaKnown RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 TSPAN17Q96FV3 270 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 UBXN6Q9BZV1 441 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 MYH13Q9UKX3 1938 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 CFAP99D6REC4 459 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 HIST1H2AGP0C0S8 130 aaPredicted RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 SPATA31D3P0C874 917 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 FGFR1P11362 822 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 HDCP19113 662 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 HIST1H2ADP20671 130 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 DUSP4Q13115 394 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 POU6F1Q14863 301 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 RETSATQ6NUM9 610 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 SPATA31D4Q6ZUB0 917 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 KATNAL2Q8IYT4 538 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 JOSD2Q8TAC2 188 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 HIST1H2AHQ96KK5 128 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 HIST1H2AJQ99878 128 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 H2AFJQ9BTM1 129 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 MORF4L1Q9UBU8 362 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 DERAQ9Y315 318 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 GOLGA4Q13439 2230 aaKnown RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 C2orf81A6NN90 581 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 XYLBO75191 536 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 USP12O75317 370 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 GTF2H3Q13889 308 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 KCTD19Q17RG1 926 aaPredicted RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 CPXM1Q96SM3 734 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 CORO1BQ9BR76 489 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 DRC3Q9H069 523 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 GGT7Q9UJ14 662 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 L1RE1Q9UN81 338 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 PLA2G4CQ9UP65 541 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 RRP15Q9Y3B9 282 aaKnown RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 CCDC85CA6NKD9 419 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 RNF103O00237 685 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 MDM1Q8TC05 714 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 LRRC40Q9H9A6 602 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
PTPRN2-202ENST00000389416 APOC4-APOC2K7ER74 178 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 APOC2P02655 101 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 PYGLP06737 847 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 RPL21P46778 160 aaKnown RBP13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 RENBPP51606 427 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 MMRN1Q13201 1228 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 PTK6Q13882 451 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 PABPC1LQ4VXU2 614 aaKnown RBP13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 HGSNATQ68CP4 663 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 NUP93Q8N1F7 819 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 TTPALQ9BTX7 342 aa13.5□□□□□ -0.25
PTPRN2-202ENST00000389416 DUSP16Q9BY84 665 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms