RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TRMT2BQ96GJ1 504 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 FAM84AQ96KN4 292 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 ZSWIM3Q96MP5 696 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 PKMYT1Q99640 499 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 HINFPQ9BQA5 517 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 IER2Q9BTL4 223 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 IL21Q9HBE4 155 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 EPB41L5Q9HCM4 733 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 PRMT8Q9NR22 394 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 HEBP1Q9NRV9 189 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 TMLHEQ9NVH6 421 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 THG1LQ9NWX6 298 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 NXF1Q9UBU9 619 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 RSPH14Q9UHP6 348 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 FEZ2Q9UHY8 353 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 DMGDHQ9UI17 866 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 NAGPAQ9UK23 515 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 MAGED2Q9UNF1 606 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 PCDHGA2Q9Y5H1 932 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 FRYLO94915 3013 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 A0A087X0T9 212 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 MYBPHLA2RUH7 354 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 FAM187AA6NFU0 413 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 SLC38A8A6NNN8 435 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 A8MXQ7 604 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 MIF4GDA9UHW6 222 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 EPHB6O15197 1021 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 PMM2O15305 246 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 EIF3HO15372 352 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 SART1O43290 800 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 F11P03951 625 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 C4BPAP04003 597 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 TMEM253P0C7T8 217 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 FAM228BP0C875 321 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 CYP2F1P24903 491 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 GRIK1P39086 918 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 VIPR2P41587 438 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 PIK3CAP42336 1068 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 CASP4P49662 377 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 VAMP7P51809 220 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 DRG2P55039 364 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 HADHBP55084 474 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 PSMC1P62191 440 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 CYP4F8P98187 520 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 GUCY2DQ02846 1103 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 CSTF1Q05048 431 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 FCHO2Q0JRZ9 810 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 FZD5Q13467 585 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 ZACNQ401N2 412 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 AGBL2Q5U5Z8 902 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 TAX1BP1Q86VP1 789 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 FAM186BQ8IYM0 893 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 ZNF687Q8N1G0 1237 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 CELF5Q8N6W0 485 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 ZBTB44Q8NCP5 570 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 BPIFB1Q8TDL5 484 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 ZNF516Q92618 1163 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 NELL1Q92832 810 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 TNIP3Q96KP6 325 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 SPATA17Q96L03 361 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 MYRFLQ96LU7 910 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 MRPL45Q9BRJ2 306 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 ELOVL4Q9GZR5 314 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 XYLT2Q9H1B5 865 aa10.89□□□□□ -0.67
COL5A1-202ENST00000371820 C8orf33Q9H7E9 229 aaPredicted RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 UTP11Q9Y3A2 253 aaKnown RBP10.89□□□□□ -0.67
COL5A1-202ENST00000371820 TICRRQ7Z2Z1 1910 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 F5P12259 2224 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 KCNK3O14649 394 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 BUB1O43683 1085 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 LILRB5O75023 590 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 ATP2C2O75185 946 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 PDGFRBP09619 1106 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 HMGA1P17096 107 aaKnown RBP10.88□□□□□ -0.67
COL5A1-202ENST00000371820 PFKLP17858 780 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
COL5A1-202ENST00000371820 TNFAIP3P21580 790 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 LMO2P25791 158 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 SOX5P35711 763 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 GYS2P54840 703 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 DDR2Q16832 855 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 MDH1BQ5I0G3 518 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 STXBP5Q5T5C0 1151 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 DENND5BQ6ZUT9 1274 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 SV2AQ7L0J3 742 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 YTHDF3Q7Z739 585 aaKnown RBP10.88□□□□□ -0.67
COL5A1-202ENST00000371820 MON1AQ86VX9 555 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 CMTM8Q8IZV2 173 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 MAB21L3Q8N8X9 362 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 B3GALNT2Q8NCR0 500 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 PLEKHO2Q8TD55 490 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 BCAS4Q8TDM0 211 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 CTNNBL1Q8WYA6 563 aaPredicted RBP10.88□□□□□ -0.67
COL5A1-202ENST00000371820 P3H4Q92791 437 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 EEF2KMTQ96G04 330 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 PCED1BQ96HM7 432 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 STMN4Q9H169 189 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms