RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ZBTB41Q5SVQ8 909 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 GMCL1Q96IK5 515 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 RILPQ96NA2 401 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 MAN1C1Q9NR34 630 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 PARVAQ9NVD7 372 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF180Q9UJW8 692 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 WDR37Q9Y2I8 494 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 NUB1Q9Y5A7 615 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 RBM47A0AV96 593 aaKnown RBP12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 FAM189A1O60320 539 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 TNFAIP8O95379 198 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 TSHRP16473 764 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 CRHR1P34998 444 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 HOXD12P35452 270 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 NUMBP49757 651 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 CDK9P50750 372 aaKnown RBP12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 SH3BGRP55822 239 aaPredicted RBP12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 NAA20P61599 178 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 STX3Q13277 289 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 ADRM1Q16186 407 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 PCGF5Q86SE9 256 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 GMCL1P1Q8NEA9 526 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 FAM110BQ8TC76 370 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 TRIM11Q96F44 468 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 IP6K2Q9UHH9 426 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 EDN1P05305 212 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 KCNA4P22459 653 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 MRPS22P82650 360 aaKnown RBP12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 ZACNQ401N2 412 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 PPM1NQ8N819 430 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 NIPA2Q8N8Q9 360 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 JOSD2Q8TAC2 188 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 PIP4K2CQ8TBX8 421 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 COPS7BQ9H9Q2 264 aaPredicted RBP12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 THAP1Q9NVV9 213 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 PKD2L1Q9P0L9 805 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 SORCS3Q9UPU3 1222 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 GDF11O95390 407 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 CFBP00751 764 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 IDO1P14902 403 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF23P17027 643 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 GNA15P30679 374 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 MAGEA3P43357 314 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 PHKA2P46019 1235 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 GTF2IP78347 998 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 IRX4P78413 519 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 PIGGQ5H8A4 983 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 CYP4A22Q5TCH4 519 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 C6orf163Q5TEZ5 329 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 NANOGP8Q6NSW7 305 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 TMEM270Q6UE05 265 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 BBS12Q6ZW61 710 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 CARM1Q86X55 608 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 MTMR10Q9NXD2 777 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 C6orf203Q9P0P8 240 aaPredicted RBP12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
SMARCA1-201ENST00000371121 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 ATP2A1O14983 1001 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 ADCY3O60266 1144 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 RNASEH2AO75792 299 aaKnown RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 P4HBP07237 508 aaKnown RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 INHBAP08476 426 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 HDAC4P56524 1084 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 RPL10AP62906 217 aaKnown RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 BASP1P80723 227 aaKnown RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 CEACAM7Q14002 265 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 FASTKD1Q53R41 847 aaKnown RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 NAPRTQ6XQN6 538 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 CRLF3Q8IUI8 442 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 BIRC8Q96P09 236 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 BRD8Q9H0E9 1235 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 PRDM16Q9HAZ2 1276 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 MRPL47Q9HD33 250 aaKnown RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 FAM198AQ9UFP1 575 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 RSL24D1Q9UHA3 163 aaKnown RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 BTAF1O14981 1849 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 CCDC160A6NGH7 325 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 STX16-NPEPL1H3BU86 382 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 ACOT8O14734 319 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 RFC1P35251 1148 aaPredicted RBP12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 MMRN1Q13201 1228 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 SLC9B1Q4ZJI4 515 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 DCAF6Q58WW2 860 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 MROH9Q5TGP6 573 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 TTLL6Q8N841 843 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 RAB3IL1Q8TBN0 382 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF606Q8WXB4 792 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 RSPH1Q8WYR4 309 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 CFAP36Q96G28 342 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 PEBP4Q96S96 227 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 FZD1Q9UP38 647 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 DOLKQ9UPQ8 538 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF711Q9Y462 761 aa12.06□□□□□ -0.48
SMARCA1-201ENST00000371121 I3L4J1 428 aa12.05□□□□□ -0.48
SMARCA1-201ENST00000371121 GPR25O00155 361 aa12.05□□□□□ -0.48
SMARCA1-201ENST00000371121 BIRC5O15392 142 aa12.05□□□□□ -0.48
SMARCA1-201ENST00000371121 DCXO43602 365 aa12.05□□□□□ -0.48
SMARCA1-201ENST00000371121 ZBED1O96006 694 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms