RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 TULP2O00295 520 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 DNM1LO00429 736 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 PMM2O15305 246 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 CILPO75339 1184 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 TADA2AO75478 443 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 USP17L7P0C7H9 530 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 ATP4AP20648 1035 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 GDF10P55107 478 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 POLE2P56282 527 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 RASA2Q15283 850 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 CYP1B1Q16678 543 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 MIB1Q86YT6 1006 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 SCG3Q8WXD2 468 aaKnown RBP8.73□□□□□ -1.01
PTPRK-206ENST00000368215 DDX1Q92499 740 aaKnown RBP8.73□□□□□ -1.01
PTPRK-206ENST00000368215 APOPT1Q96IL0 206 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
PTPRK-206ENST00000368215 NRDE2Q9H7Z3 1164 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-206ENST00000368215 PFDN6O15212 129 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 GOT1P17174 413 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 AP2B1P63010 937 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 MBTD1Q05BQ5 628 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 FNBP1LQ5T0N5 605 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 N4BP2L1Q5TBK1 243 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-206ENST00000368215 CPT1BQ92523 772 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 RMDN1Q96DB5 314 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 LPIN3Q9BQK8 851 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 PDZD7Q9H5P4 517 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 FAM96AQ9H5X1 160 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 TXNRD2Q9NNW7 524 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 SLC17A7Q9P2U7 560 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 EPS15L1Q9UBC2 864 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 TCRBV9S1A1TA0A576 114 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SPDYE5A6NIY4 337 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ABHD2P08910 425 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 HOXC6P09630 235 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SMIM10L2AP0DMW4 78 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SMIM10L2BP0DMW5 78 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ENO3P13929 434 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 PSEN2P49810 448 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 WNT7BP56706 349 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ZNF235Q14590 738 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 RCN1Q15293 331 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 MFSD5Q6N075 450 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 PMF1Q6P1K2 205 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 CRELD2Q6UXH1 353 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 GPR142Q7Z601 462 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 FAM136AQ96C01 138 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 TWNKQ96RR1 684 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SEPT5Q99719 369 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ATXN3LQ9H3M9 355 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 RBPJLQ9UBG7 517 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 C2CD2Q9Y426 696 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 H0YGN5 161 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 FAM155BO75949 473 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SLC1A5Q15758 541 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SLC10A6Q3KNW5 377 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 HSP90AA5PQ58FG0 334 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 NAPEPLDQ6IQ20 393 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 GLB1LQ6UWU2 654 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 RPAINQ86UA6 219 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 LENG1Q96BZ8 264 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SPDL1Q96EA4 605 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 LHX5Q9H2C1 402 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ACSS3Q9H6R3 686 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ARHGEF38Q9NXL2 777 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 NFS1Q9Y697 457 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 COL16A1Q07092 1604 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 GOLGA8QA0A0J9YX86 632 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 GOLGA8OA6NCC3 632 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 GOLGA8NF8WBI6 632 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 FZD9O00144 591 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 FCHO1O14526 889 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 HNRNPCL1O60812 293 aaKnown RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 GLRA3O75311 464 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ERVK-10P10266 1014 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 TCN1P20061 433 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 PSMB4P28070 264 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 RGS2P41220 211 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 OGDHQ02218 1023 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 MGAT5BQ3V5L5 792 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SPATA24Q86W54 205 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 LPPQ93052 612 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SENP8Q96LD8 212 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 LRRC40Q9H9A6 602 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ZFYVE28Q9HCC9 887 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 PCDH18Q9HCL0 1135 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 DNAJC8O75937 253 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ODC1P11926 461 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 IL1R2P27930 398 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ASPAP45381 313 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 GBE1Q04446 702 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ITGA9Q13797 1035 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 POU6F1Q14863 301 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 SLC45A4Q5BKX6 768 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 NT5DC4Q86YG4 428 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 KAT2BQ92831 832 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 MECRQ9BV79 373 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 EIF2AQ9BY44 585 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms