RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TMC7Q7Z402 723 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 MRPL43Q8N983 215 aaKnown RBP15.3■□□□□ 0.04
CXCL12-201ENST00000343575 SPATA4Q8NEY3 305 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 CMASQ8NFW8 434 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-201ENST00000343575 ADAM32Q8TC27 787 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 KLHL5Q96PQ7 755 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 TCF25Q9BQ70 676 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 UBE2OQ9C0C9 1292 aaKnown RBP15.3■□□□□ 0.04
CXCL12-201ENST00000343575 RWDD3Q9Y3V2 267 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 A0A1W2PQH9 124 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 C2orf71A6NGG8 1288 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SLC38A8A6NNN8 435 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 PI4K2BG5E9Z4 385 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 I6L893 689 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 FSCN2O14926 492 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 TGM5O43548 720 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SPATA31D3P0C874 917 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 HMGA1P17096 107 aaKnown RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 IRS1P35568 1242 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 CCT5P48643 541 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 TUFMP49411 452 aaKnown RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SULT1E1P49888 294 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 ARSEP51690 589 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 YWHAGP61981 247 aaKnown RBP eCLIP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 ADCY2Q08462 1091 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SIX1Q15475 284 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 EMC10Q5UCC4 262 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SPATA31D4Q6ZUB0 917 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 TCEAL8Q8IYN2 117 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 TTLL2Q9BWV7 592 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 FBXO44Q9H4M3 255 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 CYP4F11Q9HBI6 524 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 WDR6Q9NNW5 1121 aaKnown RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 ANLNQ9NQW6 1124 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 PIGVQ9NUD9 493 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 GMIPQ9P107 970 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 GGA2Q9UJY4 613 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 YIPF1Q9Y548 306 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 M0QYT0 321 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 PGRMC1O00264 195 aaKnown RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 CSPG5O95196 566 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 IGLV3-25P01717 112 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 CD48P09326 243 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 YWHAQP27348 245 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 C2orf54Q08AI8 447 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 TAF10Q12962 218 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 CA9Q16790 459 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 MFSD7Q6UXD7 560 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 YTHDF3Q7Z739 585 aaKnown RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 MON1AQ86VX9 555 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 CCDC185Q8N715 623 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 BCAS4Q8TDM0 211 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 DQX1Q8TE96 717 aaKnown RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 PGAP3Q96FM1 320 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SLITRK1Q96PX8 696 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 TMPRSS4Q9NRS4 437 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 RBM12Q9NTZ6 932 aaKnown RBP15.29■□□□□ 0.04
CXCL12-201ENST00000343575 NUDT5Q9UKK9 219 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 SSX2IPQ9Y2D8 614 aa15.29■□□□□ 0.04
CXCL12-201ENST00000343575 CAPN9O14815 690 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 KIAA0754O94854 1291 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 RTN3O95197 1032 aaPredicted RBP15.28■□□□□ 0.04
CXCL12-201ENST00000343575 RB1P06400 928 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 KRT7P08729 469 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 ZDHHC11BP0C7U3 371 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 ERVK-21P61565 698 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 TAZQ16635 292 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 HADHQ16836 314 aaKnown RBP15.28■□□□□ 0.04
CXCL12-201ENST00000343575 ZC3H12AQ5D1E8 599 aaKnown RBP15.28■□□□□ 0.04
CXCL12-201ENST00000343575 CCDC181Q5TID7 509 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 PLPP4Q5VZY2 271 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 SCYL2Q6P3W7 929 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 SLC13A5Q86YT5 568 aaPredicted RBP15.28■□□□□ 0.04
CXCL12-201ENST00000343575 CNPY4Q8N129 248 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 SLC7A14Q8TBB6 771 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 TGS1Q96RS0 853 aaKnown RBP15.28■□□□□ 0.04
CXCL12-201ENST00000343575 SNRNP25Q9BV90 132 aaKnown RBP15.28■□□□□ 0.04
CXCL12-201ENST00000343575 AP1M1Q9BXS5 423 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 TLR9Q9NR96 1032 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 ABCC13Q9NSE7 274 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 GPATCH2LQ9NWQ4 482 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 STAP1Q9ULZ2 295 aa15.28■□□□□ 0.04
CXCL12-201ENST00000343575 TNRC18O15417 2968 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-201ENST00000343575 PRPSAP2O60256 369 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 KRT1P04264 644 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 RALAP11233 206 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 KDELR1P24390 212 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 CDKN2BP42772 138 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 PAFAH1B1P43034 410 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 GNGT1P63211 74 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 CREMQ03060 361 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 UBE3AQ05086 875 aa15.27■□□□□ 0.04
CXCL12-201ENST00000343575 KLF1Q13351 362 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms