RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ISM2Q6H9L7 571 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 IPO4Q8TEX9 1081 aaKnown RBP20.4■□□□□ 0.86
ITGA4-202ENST00000339307 GSDMAQ96QA5 445 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 CACNA2D2Q9NY47 1150 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 HESX1Q9UBX0 185 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 HOOK1Q9UJC3 728 aaKnown RBP20.4■□□□□ 0.86
ITGA4-202ENST00000339307 CYP8B1Q9UNU6 501 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 SLC12A8A0AV02 714 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 TRIM49BA6NDI0 452 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 AP5Z1O43299 807 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 CHKAP35790 457 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 KIAA1211LQ6NV74 962 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 SLC36A4Q6YBV0 504 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 Q6ZNB5 142 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 SYT12Q8IV01 421 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 DENND1CQ8IV53 801 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 ANKRD52Q8NB46 1076 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 FAXDC2Q96IV6 333 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 DCLK3Q9C098 648 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 LRRC4Q9HBW1 653 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 TMEM74BQ9NUR3 256 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 MARCH2Q9P0N8 246 aa20.39■□□□□ 0.85
ITGA4-202ENST00000339307 A0A1W2PQF6 199 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 SLC16A3O15427 465 aaKnown RBP20.38■□□□□ 0.85
ITGA4-202ENST00000339307 KLKB1P03952 638 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 CYBBP04839 570 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 ITPKAP23677 461 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 PMS1P54277 932 aaKnown RBP20.38■□□□□ 0.85
ITGA4-202ENST00000339307 YWHAEP62258 255 aaKnown RBP20.38■□□□□ 0.85
ITGA4-202ENST00000339307 LMAN2Q12907 356 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 CUL2Q13617 745 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 SGO2Q562F6 1265 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 SH3PXD2AQ5TCZ1 1133 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 ARHGAP17Q68EM7 881 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 KIAA1324Q6UXG2 1013 aaKnown RBP20.38■□□□□ 0.85
ITGA4-202ENST00000339307 NDRG1Q92597 394 aaKnown RBP20.38■□□□□ 0.85
ITGA4-202ENST00000339307 IPO9Q96P70 1041 aaKnown RBP20.38■□□□□ 0.85
ITGA4-202ENST00000339307 UBXN6Q9BZV1 441 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 SLC6A17Q9H1V8 727 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 ARMCX3Q9UH62 379 aaPredicted RBP20.38■□□□□ 0.85
ITGA4-202ENST00000339307 TSPAN16Q9UKR8 245 aa20.38■□□□□ 0.85
ITGA4-202ENST00000339307 WASH3PC4AMC7 463 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 GIPC1O14908 333 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 NDUFS2O75306 463 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 ZBED1O96006 694 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 CISD3P0C7P0 127 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 NDUFV2P19404 249 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 ATXN3P54252 364 aaPredicted RBP20.37■□□□□ 0.85
ITGA4-202ENST00000339307 PDE4CQ08493 712 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 STIM1Q13586 685 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 ZNF276Q8N554 614 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 UBA3Q8TBC4 463 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 DDI1Q8WTU0 396 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 RNF139Q8WU17 664 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 ULBP1Q9BZM6 244 aa20.37■□□□□ 0.85
ITGA4-202ENST00000339307 AGO1Q9UL18 857 aaKnown RBP20.37■□□□□ 0.85
ITGA4-202ENST00000339307 TULP2O00295 520 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 CDX4O14627 284 aaPredicted RBP20.36■□□□□ 0.85
ITGA4-202ENST00000339307 ZNF217O75362 1048 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 DPP6P42658 865 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 BCAT1P54687 386 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 ST3GAL2Q16842 350 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 RAB41Q5JT25 222 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 SPDYCQ5MJ68 293 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 GTPBP2Q9BX10 602 aaKnown RBP20.36■□□□□ 0.85
ITGA4-202ENST00000339307 FSCN3Q9NQT6 498 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 EVLQ9UI08 416 aaPredicted RBP20.36■□□□□ 0.85
ITGA4-202ENST00000339307 PSMA7O14818 248 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 ENGP17813 658 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 PMLP29590 882 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
ITGA4-202ENST00000339307 LRRC63Q05C16 580 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 ZNF33AQ06730 810 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 STARD3Q14849 445 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 CCDC40Q4G0X9 1142 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 RGL4Q8IZJ4 473 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 SIX6OS1Q8N1H7 587 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 UCMAQ8WVF2 138 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 EDEM1Q92611 657 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 GABRG3Q99928 467 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 STON1Q9Y6Q2 735 aa20.36■□□□□ 0.85
ITGA4-202ENST00000339307 IGHV1OR15-9A0A0B4J2B8 117 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 XPO1O14980 1071 aaKnown RBP20.35■□□□□ 0.85
ITGA4-202ENST00000339307 KRT37O76014 449 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 MCCD1P59942 119 aaPredicted RBP20.35■□□□□ 0.85
ITGA4-202ENST00000339307 NUCB2P80303 420 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 ARID5AQ03989 594 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 ZNF252P-AS1Q0IIN9 211 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 ADIGQ0VDE8 80 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 BST2Q10589 180 aaKnown RBP20.35■□□□□ 0.85
ITGA4-202ENST00000339307 GEN1Q17RS7 908 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 COBLL1Q53SF7 1204 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 FYB2Q5VWT5 728 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 KLHL10Q6JEL2 608 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 FMNL3Q8IVF7 1028 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 CIPCQ9C0C6 399 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 FAM124BQ9H5Z6 455 aaPredicted RBP20.35■□□□□ 0.85
ITGA4-202ENST00000339307 PILRBQ9UKJ0 227 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 COQ4Q9Y3A0 265 aa20.35■□□□□ 0.85
ITGA4-202ENST00000339307 PCDHB4Q9Y5E5 795 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms