RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 HCRTO43612 131 aa17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 FARP2O94887 1054 aaPredicted RBP17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 MT-CO1P00395 513 aa17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 AKAP5P24588 427 aa17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 YWHAZP63104 245 aaKnown RBP17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 POU5F1BQ06416 359 aa17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 USP4Q13107 963 aa17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 BTBD7Q9P203 1132 aa17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 LRCH1Q9Y2L9 728 aa17.96■□□□□ 0.46
CHRNA5-201ENST00000299565 ADAMTSL1Q8N6G6 1762 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 C19orf81C9J6K1 198 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 VDRP11473 427 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 CCDC130P13994 396 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 ACAT1P24752 427 aaKnown RBP17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 GARSP41250 739 aaKnown RBP17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SEPT6Q14141 434 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 FKBP1CQ5VVH2 108 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 UNC5AQ6ZN44 842 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 PLD5Q8N7P1 536 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 EXT2Q93063 718 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 MOCOSQ96EN8 888 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 GMLQ99445 158 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 PNPOQ9NVS9 261 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 ZNF358Q9NW07 568 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 MSCO60682 206 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 CCDC15Q0P6D6 951 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 OLIG2Q13516 323 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 PPP1R26Q5T8A7 1209 aaPredicted RBP17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SIX6OS1Q8N1H7 587 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 PYROXD2Q8N2H3 581 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 COLGALT1Q8NBJ5 622 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SLC4A11Q8NBS3 891 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 PEBP4Q96S96 227 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 PIDD1Q9HB75 910 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 TAGLN3Q9UI15 199 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 HNRNPCL1O60812 293 aaKnown RBP17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SULT1E1P49888 294 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 RABGGTBP53611 331 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SNX16P57768 344 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 RTP1P59025 263 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 TDRPQ86YL5 185 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 CLEC4CQ8WTT0 213 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 PPWD1Q96BP3 646 aaKnown RBP17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 TMA16Q96EY4 203 aaKnown RBP17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SLC39A10Q9ULF5 831 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 AK5Q9Y6K8 562 aa17.95■□□□□ 0.46
CHRNA5-201ENST00000299565 SMNDC1O75940 238 aaKnown RBP eCLIP17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 METTL18O95568 372 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 ASPAP45381 313 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 COPAP53621 1224 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 RALGPS1Q5JS13 557 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 LPCAT4Q643R3 524 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 PMF1Q6P1K2 205 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 USP13Q92995 863 aaPredicted RBP17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 ZNF184Q99676 751 aaPredicted RBP17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 PHACTR1Q9C0D0 580 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 SDCBP2Q9H190 292 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 FNDC3AQ9Y2H6 1198 aaKnown RBP17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 TPP1O14773 563 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 MAFO75444 373 aaPredicted RBP17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 TUBP50607 506 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 NEK3P51956 506 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 ZNF143P52747 638 aaPredicted RBP17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 SLC25A11Q02978 314 aaKnown RBP17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 ITKQ08881 620 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 MED21Q13503 144 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 GSDMBQ8TAX9 411 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 MARK4Q96L34 752 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 SPATC1LQ9H0A9 340 aa17.94■□□□□ 0.46
CHRNA5-201ENST00000299565 SLC1A6P48664 564 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 PAPOLAP51003 745 aaKnown RBP17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 SLC12A2P55011 1212 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 IRX1P78414 480 aaPredicted RBP17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 ART3Q13508 389 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 MAP7D1Q3KQU3 841 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 CATSPERGQ6ZRH7 1159 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 SPATA24Q86W54 205 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 TREML1Q86YW5 311 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 ULK2Q8IYT8 1036 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 ARFGAP1Q8N6T3 406 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 SNTG2Q9NY99 539 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 CORO1CQ9ULV4 474 aaPredicted RBP17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 PLA2G4CQ9UP65 541 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 HOXC6P09630 235 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 SRGAP2BP0DMP2 458 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 GOT1P17174 413 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 NUDT2P50583 147 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 PGGT1BP53609 377 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 DSG1Q02413 1049 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 RYBPQ8N488 228 aaPredicted RBP17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 ADA2Q9NZK5 511 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 CPSF3Q9UKF6 684 aaKnown RBP17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 MAFBQ9Y5Q3 323 aaPredicted RBP17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 PLSCR1O15162 318 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 SPAG6O75602 509 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 BAG6P46379 1132 aa17.93■□□□□ 0.46
CHRNA5-201ENST00000299565 NOMO1Q15155 1222 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms