RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CDC73Q6P1J9 531 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 PTPRN2Q92932 1015 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 EMILIN2Q9BXX0 1053 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 FKBP14Q9NWM8 211 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 ING3Q9NXR8 418 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.4□□□□□ -0.583e-10■■■■■ 28.1
MSH6-201ENST00000234420 HBS1LQ9Y450 684 aaKnown RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 ATG7O95352 703 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 CALB2P22676 271 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 SLC34A1Q06495 639 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 NAT16Q8N8M0 369 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 EXOC2Q96KP1 924 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 FAM111AQ96PZ2 611 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 SEPHS2Q99611 448 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 TOR3AQ9H497 397 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 A0A0G2JPF8 293 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 HNRNPCL3B7ZW38 293 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 PHF2O75151 1096 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 FKBP6O75344 327 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 RPN2P04844 631 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 HNRNPCL4P0DMR1 293 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 LSM3P62310 102 aaKnown RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 DCAF4Q8WV16 495 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 PMPCBO75439 489 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 CPSF4O95639 269 aaKnown RBP11.4□□□□□ -0.59
MSH6-201ENST00000234420 NOS3P29474 1203 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 PTPN7P35236 360 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 IL6STP40189 918 aaPredicted RBP11.4□□□□□ -0.59
MSH6-201ENST00000234420 QPRTQ15274 297 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 WDR72Q3MJ13 1102 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 TBCELQ5QJ74 424 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 ERMARDQ5T6L9 678 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 PCNX4Q63HM2 1172 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 DSG4Q86SJ6 1040 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 LRRC17Q8N6Y2 441 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 B3GALNT2Q8NCR0 500 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 LSM14AQ8ND56 463 aaKnown RBP11.4□□□□□ -0.59
MSH6-201ENST00000234420 ZNF560Q96MR9 790 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 AIFM3Q96NN9 605 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 OSBPL2Q9H1P3 480 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 CUEDC1Q9NWM3 386 aaPredicted RBP11.4□□□□□ -0.59
MSH6-201ENST00000234420 ARHGEF38Q9NXL2 777 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 TMCC3Q9ULS5 477 aa11.4□□□□□ -0.59
MSH6-201ENST00000234420 CLOCKO15516 846 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 CBX3Q13185 183 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 POMZP3Q6PJE2 187 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 FBXO16Q8IX29 292 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 IQCF2Q8IXL9 164 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 ZC3H10Q96K80 434 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 CHP1Q99653 195 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 GNB5O14775 395 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 THRAP10827 490 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 HIST2H2ACQ16777 129 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 HIST2H2AA3Q6FI13 130 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TUBA3EQ6PEY2 450 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TXNDC11Q6PKC3 985 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 DEFB119Q8N690 84 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 GTPBP2Q9BX10 602 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 PRKD2Q9BZL6 878 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 GRID1Q9ULK0 1009 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 EEF2KO00418 725 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 IL12AP29459 219 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 RASA2Q15283 850 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 C5orf22Q49AR2 442 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 PLPP4Q5VZY2 271 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 GPD1LQ8N335 351 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 SVOPQ8N4V2 548 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TRPV5Q9NQA5 729 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TRNAU1APQ9NX07 287 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 H3BRB1 525 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 H7C0S8 307 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 IFRD1O00458 451 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 VWA5AO00534 786 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 KPNA5O15131 536 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 MAGEA4P43358 317 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 EPS8Q12929 822 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TTC23Q5W5X9 447 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 CLEC10AQ8IUN9 316 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TMEM237Q96Q45 408 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 COPS4Q9BT78 406 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TRIM64CA6NLI5 447 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TFECO14948 347 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 DDNO94850 711 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 MAGP20916 626 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 HSD17B3P37058 310 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 PYDC2Q56P42 97 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 RESP18Q5W5W9 173 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 RASAL3Q86YV0 1011 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 NOA1Q8NC60 698 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 OR10G6Q8NH81 332 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 EIF2AK1Q9BQI3 630 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 CYP39A1Q9NYL5 469 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 WWOXQ9NZC7 414 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 TIMM13Q9Y5L4 95 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 SCAMP1O15126 338 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 ITIH2P19823 946 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 EFEMP1Q12805 493 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms