RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 AKT3Q9Y243 479 aa12.24□□□□□ -0.45
C11orf54-215ENST00000617482 NR2E3Q9Y5X4 410 aa12.24□□□□□ -0.45
C11orf54-215ENST00000617482 POLR2AP24928 1970 aaKnown RBP12.24□□□□□ -0.45
C11orf54-215ENST00000617482 I3L4J1 428 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 KRT36O76013 467 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 C22orf31O95567 290 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 METTL18O95568 372 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 CSH1P0DML2 217 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 CSH2P0DML3 217 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 INSRRP14616 1297 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 ARF4P18085 180 aaPredicted RBP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 GRIA1P42261 906 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 PHKA2P46019 1235 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 ATXN1P54253 815 aaKnown RBP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 IRX4P78413 519 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 PDK2Q15119 407 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 CHI3L2Q15782 390 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 AMHR2Q16671 573 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 HSF5Q4G112 596 aaPredicted RBP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 ACOT1Q86TX2 421 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 ARID3BQ8IVW6 561 aaPredicted RBP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 DTX3LQ8TDB6 740 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 ACAP3Q96P50 834 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 LPIN3Q9BQK8 851 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 OSBPL1AQ9BXW6 950 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 GBA2Q9HCG7 927 aaPredicted RBP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 MGAMO43451 1857 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 APOEP02649 317 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 MCF2P10911 925 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 PRKCHP24723 683 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 SDC4P31431 198 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 ERFP50548 548 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 MUM1Q2TAK8 710 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 CAPRIN2Q6IMN6 1127 aaKnown RBP12.23□□□□□ -0.45
C11orf54-215ENST00000617482 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 NDUFAF2Q8N183 169 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 E2F7Q96AV8 911 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 ASB7Q9H672 318 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 VRTNQ9H8Y1 702 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 PCMTD2Q9NV79 361 aa12.23□□□□□ -0.45
C11orf54-215ENST00000617482 BCLAF3A2AJT9 711 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 B2RBV5 119 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 TRDMT1O14717 391 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 CNMDO75829 334 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 LMNAP02545 664 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ENO1P06733 434 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ATP6V1C1P21283 382 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 TGM2P21980 687 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 RBP5P82980 135 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 TNFAIP2Q03169 654 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 GBE1Q04446 702 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 INCA1Q0VD86 236 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 SLC10A2Q12908 348 aaPredicted RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 SLC9A4Q6AI14 798 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ANO7Q6IWH7 933 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 OLFML1Q6UWY5 402 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 TTC30AQ86WT1 665 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 SLC16A10Q8TF71 515 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 DNAJC9Q8WXX5 260 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.459e-10■■■■□ 24.3
C11orf54-215ENST00000617482 RTP4Q96DX8 246 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ANKRD27Q96NW4 1050 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 C20orf27Q9GZN8 174 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 RPL26L1Q9UNX3 145 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 HMX2A2RU54 273 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 H3BRJ5 948 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 CAPN9O14815 690 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 KLF11O14901 512 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 RARBP10826 455 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 CYP2F1P24903 491 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 PGM1P36871 562 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 HDAC4P56524 1084 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 RCN2Q14257 317 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ZCCHC23Q6ZST2 131 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 TREML1Q86YW5 311 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 TEX9Q8N6V9 391 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 SH3TC2Q8TF17 1288 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 KIF12Q96FN5 646 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 MRPL45Q9BRJ2 306 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 DHX35Q9H5Z1 703 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 NRDE2Q9H7Z3 1164 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ELP3Q9H9T3 547 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 PIH1D1Q9NWS0 290 aaKnown RBP12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ERAP1Q9NZ08 941 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 GPRC5DQ9NZD1 345 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 STOML1Q9UBI4 398 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 ZNF180Q9UJW8 692 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms