RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ACAD9Q9H845 621 aa5.72□□□□□ -1.49
LINC00397-202ENST00000606785 STEAP1Q9UHE8 339 aa5.72□□□□□ -1.49
LINC00397-202ENST00000606785 EIF2B4Q9UI10 523 aaKnown RBP5.72□□□□□ -1.49
LINC00397-202ENST00000606785 SORCS3Q9UPU3 1222 aa5.72□□□□□ -1.49
LINC00397-202ENST00000606785 ZBTB1Q9Y2K1 713 aa5.72□□□□□ -1.49
LINC00397-202ENST00000606785 CYP46A1Q9Y6A2 500 aa5.72□□□□□ -1.49
LINC00397-202ENST00000606785 PGPEP1LA6NFU8 196 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 ZAR1LA6NP61 321 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 SEPT4O43236 478 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 CTIFO43310 598 aaKnown RBP5.71□□□□□ -1.5
LINC00397-202ENST00000606785 FOXS1O43638 330 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 USO1O60763 962 aaKnown RBP5.71□□□□□ -1.5
LINC00397-202ENST00000606785 ZBED4O75132 1171 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 RPS6KA4O75676 772 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 CFIP05156 583 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 PBX1P40424 430 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 GSTM5P46439 218 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 CLNS1AP54105 237 aaKnown RBP5.71□□□□□ -1.5
LINC00397-202ENST00000606785 CXADRP78310 365 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 KRT32Q14532 448 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 BAK1Q16611 211 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 LY6KQ17RY6 165 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 NRN1LQ496H8 165 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 ZNF484Q5JVG2 852 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 WDR45BQ5MNZ6 344 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 NAA35Q5VZE5 725 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 B3GNTL1Q67FW5 361 aaPredicted RBP5.71□□□□□ -1.5
LINC00397-202ENST00000606785 SLC9A4Q6AI14 798 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.71□□□□□ -1.5
LINC00397-202ENST00000606785 TMEM132CQ8N3T6 1108 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 METTL25Q8N6Q8 603 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 ANKRD52Q8NB46 1076 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 ADAMTS15Q8TE58 950 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 SLC22A17Q8WUG5 538 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 RNF125Q96EQ8 232 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 AMBRA1Q9C0C7 1298 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 SERHL2Q9H4I8 314 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 PPP4R1LQ9P1A2 415 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 ORC3Q9UBD5 711 aaPredicted RBP5.71□□□□□ -1.5
LINC00397-202ENST00000606785 BAG5Q9UL15 447 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 DRG1Q9Y295 367 aaKnown RBP5.71□□□□□ -1.5
LINC00397-202ENST00000606785 FPGT-TNNI3KV9GXZ4 949 aa5.71□□□□□ -1.5
LINC00397-202ENST00000606785 LOC105369274A0A096LPK9 316 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 LOC102723532A0A0G2JNH3 316 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 FSD2A1L4K1 749 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 NPEPPSL1A6NEC2 478 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 EXOC5O00471 708 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 TRIM24O15164 1050 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 CYP27B1O15528 508 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 KLK10O43240 276 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 CSF1P09603 554 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 DRD1P21728 446 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 PSMC2P35998 433 aaKnown RBP5.7□□□□□ -1.5
LINC00397-202ENST00000606785 MTAPQ13126 283 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 DCTN1Q14203 1278 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 CYP2A13Q16696 494 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 TSTQ16762 297 aaKnown RBP5.7□□□□□ -1.5
LINC00397-202ENST00000606785 GEN1Q17RS7 908 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 ZNF280DQ6N043 979 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 DBX2Q6ZNG2 339 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 Q6ZRM9 215 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 OR4N4Q8N0Y3 316 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 OVCA2Q8WZ82 227 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 REXO5Q96IC2 774 aaKnown RBP5.7□□□□□ -1.5
LINC00397-202ENST00000606785 BOD1Q96IK1 185 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 EIF3CQ99613 913 aaKnown RBP5.7□□□□□ -1.5
LINC00397-202ENST00000606785 TEX101Q9BY14 249 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 PRDM13Q9H4Q3 707 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 TRIM36Q9NQ86 728 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 TRPM5Q9NZQ8 1165 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 NKX1-2Q9UD57 310 aaPredicted RBP5.7□□□□□ -1.5
LINC00397-202ENST00000606785 ASAP1Q9ULH1 1129 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 XDHP47989 1333 aa5.7□□□□□ -1.5
LINC00397-202ENST00000606785 TCERG1O14776 1098 aaKnown RBP5.69□□□□□ -1.5
LINC00397-202ENST00000606785 RECQL4O94761 1208 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 TMEM225BP0DP42 221 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 CPA1P15085 419 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 HOXA5P20719 270 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 RPS6KB1P23443 525 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 GATA3P23771 443 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 ABCD3P28288 659 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 PGM1P36871 562 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 CCT4P50991 539 aaKnown RBP5.69□□□□□ -1.5
LINC00397-202ENST00000606785 SCNN1GP51170 649 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 ATXN1P54253 815 aaKnown RBP5.69□□□□□ -1.5
LINC00397-202ENST00000606785 EIF4A1P60842 406 aaKnown RBP5.69□□□□□ -1.5
LINC00397-202ENST00000606785 SP2Q02086 613 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 NUCB1Q02818 461 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 GALNT2Q10471 571 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 GPR68Q15743 365 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 FAM90A2PQ658T7 463 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 HAUS3Q68CZ6 603 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 SP5Q6BEB4 398 aaPredicted RBP5.69□□□□□ -1.5
LINC00397-202ENST00000606785 CCDC144NLQ6NUI1 221 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 LRRC8DQ7L1W4 858 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 KRT27Q7Z3Y8 459 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 ARMC8Q8IUR7 673 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 FAM71DQ8N9W8 422 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 FSIP1Q8NA03 581 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 C1orf131Q8NDD1 294 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms