RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 CYFIP2Q96F07 1278 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 HNRNPABQ99729 332 aaKnown RBP11.03□□□□□ -0.64
FARP1-240ENST00000602263 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
FARP1-240ENST00000602263 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 SLC32A1Q9H598 525 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 PNPLA8Q9NP80 782 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 MARK1Q9P0L2 795 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 CALCOCO1Q9P1Z2 691 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 MBD1Q9UIS9 605 aaPredicted RBP11.03□□□□□ -0.64
FARP1-240ENST00000602263 DNMT3LQ9UJW3 386 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 TRAF3IP3Q9Y228 551 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 STARD13Q9Y3M8 1113 aa11.03□□□□□ -0.64
FARP1-240ENST00000602263 ATXN2Q99700 1313 aaKnown RBP11.03□□□□□ -0.64
FARP1-240ENST00000602263 A0A1W2PQH9 124 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 CDX4O14627 284 aaPredicted RBP11.02□□□□□ -0.65
FARP1-240ENST00000602263 RALAP11233 206 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 RARGP13631 454 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 ENGP17813 658 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 GABRG2P18507 467 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 CD58P19256 250 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 ITPKAP23677 461 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 SYKP43405 635 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 PLA2G4AP47712 749 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 GCLMP48507 274 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 PSEN1P49768 467 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 KRT85P78386 507 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 ENPEPQ07075 957 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 PKP1Q13835 747 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 DUOXA1Q1HG43 343 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 EGFLAMQ63HQ2 1017 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 SLC23A3Q6PIS1 610 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 GPRIN1Q7Z2K8 1008 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 FAM186BQ8IYM0 893 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 HDDC3Q8N4P3 179 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 FRMD1Q8N878 549 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 DEFB124Q8NES8 71 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 WBP2Q969T9 261 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 SPATA32Q96LK8 384 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 CDK5RAP1Q96SZ6 601 aaKnown RBP11.02□□□□□ -0.65
FARP1-240ENST00000602263 MMRN2Q9H8L6 949 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
FARP1-240ENST00000602263 NAGPAQ9UK23 515 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 PILRBQ9UKJ0 227 aa11.02□□□□□ -0.65
FARP1-240ENST00000602263 PCDH15Q96QU1 1955 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 CKAP5Q14008 2032 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 KNL1Q8NG31 2342 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 ASPMQ8IZT6 3477 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 A0A1W2PQF6 199 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 TRIM24O15164 1050 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 CILPO75339 1184 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 PROS1P07225 676 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 TRIM49P0CI25 452 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 TRIM49CP0CI26 452 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 PSMC2P35998 433 aaKnown RBP11.01□□□□□ -0.65
FARP1-240ENST00000602263 DGKGP49619 791 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 PGFP49763 221 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 GFPT1Q06210 699 aaPredicted RBP11.01□□□□□ -0.65
FARP1-240ENST00000602263 NFIL3Q16649 462 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 C1orf220Q5T0J3 134 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 UNQ6494/PRO21346Q6UXR6 183 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 MIB1Q86YT6 1006 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 TTC39CQ8N584 583 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 TAS1R2Q8TE23 839 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 IPO4Q8TEX9 1081 aaKnown RBP11.01□□□□□ -0.65
FARP1-240ENST00000602263 CCDC34Q96HJ3 373 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 TWNKQ96RR1 684 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 GTPBP2Q9BX10 602 aaKnown RBP11.01□□□□□ -0.65
FARP1-240ENST00000602263 DUSP16Q9BY84 665 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 NMUR1Q9HB89 426 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 TMEM74BQ9NUR3 256 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 OSER1Q9NX31 292 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 CLIC5Q9NZA1 410 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 SLC6A14Q9UN76 642 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 HPSEQ9Y251 543 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 AKAP13Q12802 2813 aa11.01□□□□□ -0.65
FARP1-240ENST00000602263 ZFHX4Q86UP3 3567 aa11□□□□□ -0.65
FARP1-240ENST00000602263 PRRT4C9JH25 899 aa11□□□□□ -0.65
FARP1-240ENST00000602263 HHLA1C9JL84 531 aa11□□□□□ -0.65
FARP1-240ENST00000602263 GFRA2O00451 464 aa11□□□□□ -0.65
FARP1-240ENST00000602263 MDM4O15151 490 aa11□□□□□ -0.65
FARP1-240ENST00000602263 GREM1O60565 184 aa11□□□□□ -0.65
FARP1-240ENST00000602263 NDUFS2O75306 463 aa11□□□□□ -0.65
FARP1-240ENST00000602263 STC2O76061 302 aa11□□□□□ -0.65
FARP1-240ENST00000602263 RHOBTB3O94955 611 aa11□□□□□ -0.65
FARP1-240ENST00000602263 SERPINF2P08697 491 aa11□□□□□ -0.65
FARP1-240ENST00000602263 NDUFV2P19404 249 aa11□□□□□ -0.65
FARP1-240ENST00000602263 GTF2H1P32780 548 aa11□□□□□ -0.65
FARP1-240ENST00000602263 KIF11P52732 1056 aa11□□□□□ -0.65
FARP1-240ENST00000602263 SLC8A3P57103 927 aa11□□□□□ -0.65
FARP1-240ENST00000602263 ZNF33AQ06730 810 aa11□□□□□ -0.65
FARP1-240ENST00000602263 PPP3CAQ08209 521 aa11□□□□□ -0.65
FARP1-240ENST00000602263 ADAM9Q13443 819 aa11□□□□□ -0.65
FARP1-240ENST00000602263 STARD3Q14849 445 aa11□□□□□ -0.65
FARP1-240ENST00000602263 E2F5Q15329 346 aa11□□□□□ -0.65
FARP1-240ENST00000602263 PEAR1Q5VY43 1037 aaPredicted RBP11□□□□□ -0.65
FARP1-240ENST00000602263 KIAA1324Q6UXG2 1013 aaKnown RBP11□□□□□ -0.65
FARP1-240ENST00000602263 RSRC2Q7L4I2 434 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms