RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 MANSC1Q9H8J5 431 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 PCDH9Q9HC56 1237 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
LIG1-220ENST00000601091 MYPNQ86TC9 1320 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 PLSCR1O15162 318 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 KCNN4O15554 427 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 CAPN1P07384 714 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 DPEP1P16444 411 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 CHRNB2P17787 502 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 TARSP26639 723 aaKnown RBP10.78□□□□□ -0.68
LIG1-220ENST00000601091 TSPAN7P41732 249 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 PTGER2P43116 358 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 MRPS9P82933 396 aaKnown RBP10.78□□□□□ -0.68
LIG1-220ENST00000601091 LACTB2Q53H82 288 aaPredicted RBP10.78□□□□□ -0.68
LIG1-220ENST00000601091 ATF7IP2Q5U623 682 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 ZDHHC24Q6UX98 284 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 KRT77Q7Z794 578 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 SESTD1Q86VW0 696 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 CHST13Q8NET6 341 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
LIG1-220ENST00000601091 CCT6BQ92526 530 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 RBM14Q96PK6 669 aaKnown RBP10.78□□□□□ -0.68
LIG1-220ENST00000601091 TTLL3Q9Y4R7 772 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 ACTL7BQ9Y614 415 aa10.78□□□□□ -0.68
LIG1-220ENST00000601091 CCDC160A6NGH7 325 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 GJB6O95452 261 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 MRPS5P82675 430 aaKnown RBP10.77□□□□□ -0.68
LIG1-220ENST00000601091 EN1Q05925 392 aaPredicted RBP10.77□□□□□ -0.68
LIG1-220ENST00000601091 XRCC4Q13426 336 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 TLDC1Q6P9B6 456 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 WDR49Q8IV35 697 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 LRRC71Q8N4P6 559 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 APOL6Q9BWW8 343 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 OCEL1Q9H607 264 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 ZC3H7BQ9UGR2 993 aaKnown RBP10.77□□□□□ -0.68
LIG1-220ENST00000601091 SCOCQ9UIL1 159 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 HAO1Q9UJM8 370 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 GMEB1Q9Y692 573 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 ZMYM2Q9UBW7 1377 aa10.77□□□□□ -0.68
LIG1-220ENST00000601091 RPTORQ8N122 1335 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 DPPA5A6NC42 116 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 TXNDC9O14530 226 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 NPPAP01160 153 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 TAGLNQ01995 201 aaKnown RBP10.77□□□□□ -0.69
LIG1-220ENST00000601091 MAP3K21Q5TCX8 1036 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 CCDC60Q8IWA6 550 aaPredicted RBP10.77□□□□□ -0.69
LIG1-220ENST00000601091 TRPV6Q9H1D0 765 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 PAK5Q9P286 719 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 ANGPTL2Q9UKU9 493 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 AGAP1Q9UPQ3 857 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 C15orf41Q9Y2V0 281 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 TOGARAM1Q9Y4F4 1720 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 SYNDIG1LA6NDD5 238 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 A8MX80 341 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 APOL1O14791 398 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 GFAPP14136 432 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 MZF1P28698 734 aaPredicted RBP10.77□□□□□ -0.69
LIG1-220ENST00000601091 GBE1Q04446 702 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 SCUBE1Q8IWY4 988 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 DNAAF3Q8N9W5 541 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 FBXO36Q8NEA4 188 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 PWWP2AQ96N64 755 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 SERHL2Q9H4I8 314 aa10.77□□□□□ -0.69
LIG1-220ENST00000601091 METTL5Q9NRN9 209 aaKnown RBP10.77□□□□□ -0.69
LIG1-220ENST00000601091 MTO1Q9Y2Z2 717 aaKnown RBP10.77□□□□□ -0.69
LIG1-220ENST00000601091 RBMX2Q9Y388 322 aaKnown RBP10.77□□□□□ -0.69
LIG1-220ENST00000601091 F8VP50 259 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 PMM2O15305 246 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 IL18RAPO95256 599 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 ZSCAN5DPP0CG00 497 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 KITP10721 976 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 UBL4AP11441 157 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 OSBPP22059 807 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 RPS12P25398 132 aaKnown RBP10.76□□□□□ -0.69
LIG1-220ENST00000601091 RTP1P59025 263 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 MTFR1Q15390 333 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 PKN2Q16513 984 aaKnown RBP10.76□□□□□ -0.69
LIG1-220ENST00000601091 CYP1B1Q16678 543 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 ZNF354CQ86Y25 554 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 CRYGNQ8WXF5 182 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 HDAC2Q92769 488 aaKnown RBP10.76□□□□□ -0.69
LIG1-220ENST00000601091 ANKRD27Q96NW4 1050 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 MED10Q9BTT4 135 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 ADNPQ9H2P0 1102 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 FARSBQ9NSD9 589 aaKnown RBP10.76□□□□□ -0.69
LIG1-220ENST00000601091 COL20A1Q9P218 1284 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 BCAP29Q9UHQ4 241 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 HACL1Q9UJ83 578 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 C5orf60A6NFR6 353 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 PIK3R2O00459 728 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 GAS2O43903 313 aaKnown RBP10.76□□□□□ -0.69
LIG1-220ENST00000601091 PIAS1O75925 651 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 KRT75O95678 551 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 CCNE2O96020 404 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 SNRPAP09012 282 aaKnown RBP10.76□□□□□ -0.69
LIG1-220ENST00000601091 ALDH5A1P51649 535 aaPredicted RBP10.76□□□□□ -0.69
LIG1-220ENST00000601091 NOMO3P69849 1222 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 ATP13A4Q4VNC1 1196 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 DAB2IPQ5VWQ8 1189 aa10.76□□□□□ -0.69
LIG1-220ENST00000601091 TDRD10Q5VZ19 366 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms