RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 LRP3O75074 770 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 TULP3O75386 442 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 KLKB1P03952 638 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 ERCC5P28715 1186 aaPredicted RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 CHKAP35790 457 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 KIR2DL1P43626 348 aaPredicted RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 PXNP49023 591 aaPredicted RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 SEC13P55735 322 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 SRSF5Q13243 272 aaKnown RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 CRY1Q16526 586 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 ANO4Q32M45 955 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 C2orf27AQ580R0 203 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 CT47A1Q5JQC4 288 aaPredicted RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 BSPRYQ5W0U4 402 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 PRR23BQ6ZRT6 265 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 CACNA2D4Q7Z3S7 1137 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 MIB1Q86YT6 1006 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 ARHGEF19Q8IW93 802 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 NAT16Q8N8M0 369 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 IL17RCQ8NAC3 791 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 LOXL4Q96JB6 756 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 HSFY1Q96LI6 401 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 IPO9Q96P70 1041 aaKnown RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 XPO6Q96QU8 1125 aaKnown RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 ZSWIM1Q9BR11 485 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 UBE2TQ9NPD8 197 aaPredicted RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 OLA1Q9NTK5 396 aaKnown RBP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 MARCH2Q9P0N8 246 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 FBXO10Q9UK96 956 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 STRIP2Q9ULQ0 834 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC9-203ENST00000596938 STARD13Q9Y3M8 1113 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 ANAPC1Q9H1A4 1944 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 OTOGLQ3ZCN5 2332 aa11.02□□□□□ -0.64
CCDC9-203ENST00000596938 GTPBP10A4D1E9 387 aaKnown RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 ANTXRLA6NF34 631 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 CACNG3O60359 315 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 RPP40O75818 363 aaKnown RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 GABBR2O75899 941 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 PRKCSHP14314 528 aaPredicted RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 TYRP14679 529 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 RPL34P49207 117 aaKnown RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 DGKEP52429 567 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 MFAP3P55082 362 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 ADIGQ0VDE8 80 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 EFEMP1Q12805 493 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 MEA1Q16626 185 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 EOGTQ5NDL2 527 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 EMC10Q5UCC4 262 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 PMF1Q6P1K2 205 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 GBP6Q6ZN66 633 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 CEP68Q76N32 757 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 RSRC2Q7L4I2 434 aaKnown RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 RASSF3Q86WH2 238 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 CREBRFQ8IUR6 639 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 SFTPA1Q8IWL2 248 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 SIX6OS1Q8N1H7 587 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 CCDC33Q8N5R6 958 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 TSTD1Q8NFU3 115 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 RNF139Q8WU17 664 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 IRGQQ8WZA9 623 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 NDRG1Q92597 394 aaKnown RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 ZC3H10Q96K80 434 aaKnown RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 HHIPQ96QV1 700 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 BBS2Q9BXC9 721 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 THAP9Q9H5L6 903 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 ABCC13Q9NSE7 274 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 LMBRD1Q9NUN5 540 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 RASAL2Q9UJF2 1139 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 AGO1Q9UL18 857 aaKnown RBP11.02□□□□□ -0.65
CCDC9-203ENST00000596938 DCHS1Q96JQ0 3298 aa11.02□□□□□ -0.65
CCDC9-203ENST00000596938 SLC12A8A0AV02 714 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 YJEFN3A6XGL0 299 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 E7ENQ6 273 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 NEDD8-MDP1E9PL57 170 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 ALDH1A2O94788 518 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 FBXO21O94952 628 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 CISD3P0C7P0 127 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 BRD2P25440 801 aaKnown RBP11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TIE1P35590 1138 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 GPD2P43304 727 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 ID4P47928 161 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 DAOAP59103 153 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TRIP4Q15650 581 aaPredicted RBP11.01□□□□□ -0.65
CCDC9-203ENST00000596938 LPAL2Q16609 132 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TPD52L1Q16890 204 aaPredicted RBP11.01□□□□□ -0.65
CCDC9-203ENST00000596938 EXOC3L4Q17RC7 722 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 DPCR1Q3MIW9 517 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 GRAMD4Q6IC98 578 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TRIM65Q6PJ69 517 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TPGS1Q6ZTW0 290 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TRMT11Q7Z4G4 463 aaKnown RBP11.01□□□□□ -0.65
CCDC9-203ENST00000596938 FAM114A1Q8IWE2 563 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 CPXM2Q8N436 756 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 FAM160A2Q8N612 972 aaPredicted RBP11.01□□□□□ -0.65
CCDC9-203ENST00000596938 ALLCQ8N6M5 410 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TERB1Q8NA31 727 aa11.01□□□□□ -0.65
CCDC9-203ENST00000596938 TXNDC5Q8NBS9 432 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms