RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 LUZP1Q86V48 1076 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 SCUBE3Q8IX30 993 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 TMEM35BQ8NCS4 154 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 SYNCQ9H7C4 482 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 LMAN1LQ9HAT1 526 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 HBS1LQ9Y450 684 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 MTF2Q9Y483 593 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 TRIOO75962 3097 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 ANAPC1Q9H1A4 1944 aa18.08■□□□□ 0.49
SHKBP1-212ENST00000596163 PATJQ8NI35 1801 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 A0A1B0GTH6 734 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 A0A1W2PQC6 194 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 SLC12A8A0AV02 714 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 SHISA7A6NL88 538 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 TRDMT1O14717 391 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 MDM4O15151 490 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 GABBR2O75899 941 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 GFPT2O94808 682 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 PTPN5P54829 565 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 JAM2P57087 298 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 GAD2Q05329 585 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 PON2Q15165 354 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 DHCR24Q15392 516 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 BEND5Q7L4P6 421 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 PASD1Q8IV76 773 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 SYNPOQ8N3V7 929 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 WDTC1Q8N5D0 677 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 MSANTD4Q8NCY6 345 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 CCDC26Q8TAB7 109 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 IPO4Q8TEX9 1081 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 EDEM1Q92611 657 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 FAM149B1Q96BN6 582 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 PLD4Q96BZ4 506 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 P2RY13Q9BPV8 354 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 DLGAP2Q9P1A6 1054 aa18.08■□□□□ 0.48
SHKBP1-212ENST00000596163 OTOL1A6NHN0 477 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 E5RJQ4 531 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 CAPN9O14815 690 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 TEX33O43247 280 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 STC2O76061 302 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 LSM8O95777 96 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 DRD1P21728 446 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 PREPLQ4J6C6 727 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 EFHC1Q5JVL4 640 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 TXNDC11Q6PKC3 985 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 ZDHHC17Q8IUH5 632 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 BBS7Q8IWZ6 715 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 C1orf131Q8NDD1 294 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 CD101Q93033 1021 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 TSPY26PQ9H489 355 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 RAPGEFL1Q9UHV5 662 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 CYTH4Q9UIA0 394 aa18.07■□□□□ 0.48
SHKBP1-212ENST00000596163 SCAMP3O14828 347 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 EPHB6O15197 1021 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 CYP17A1P05093 508 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 GLI1P08151 1106 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 HMBSP08397 361 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 CHRNB1P11230 501 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 ADH5P11766 374 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 NCAM1P13591 858 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 CDH5P33151 784 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 CHKAP35790 457 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 HARS2P49590 506 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 GALK1P51570 392 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 YWHAZP63104 245 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 FANCCQ00597 558 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 FZD5Q13467 585 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 NR1I3Q14994 352 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 TMEM196Q5HYL7 178 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 TAF3Q5VWG9 929 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 MSANTD2Q6P1R3 559 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 RHBDF2Q6PJF5 856 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 LRSAM1Q6UWE0 723 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 ZNF687Q8N1G0 1237 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 CLEC4CQ8WTT0 213 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 POPDC2Q9HBU9 364 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 SPHK2Q9NRA0 654 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 SPATA6Q9NWH7 488 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 ASNSD1Q9NWL6 643 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 WDR35Q9P2L0 1181 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 MYO6Q9UM54 1294 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 ZDBF2Q9HCK1 2354 aa18.06■□□□□ 0.48
SHKBP1-212ENST00000596163 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 GREM1O60565 184 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 TPM3P06753 285 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 FERP16591 822 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 EIF2DP41214 584 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 UBASH3AP57075 661 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 CDR2Q01850 454 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 TRIP4Q15650 581 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 FBXO43Q4G163 708 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 LY6G5CQ5SRR4 150 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 OR6B2Q6IFH4 312 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 TRIM72Q6ZMU5 477 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 Q6ZNB5 142 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 TOGARAM2Q6ZUX3 1019 aa18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 NOP9Q86U38 636 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-212ENST00000596163 ERICH1Q86X53 443 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms