RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TLR5O60602 858 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 GNA14O95837 355 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 PIK3CAP42336 1068 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 PTGER3P43115 390 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 GCLMP48507 274 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 C1orf220Q5T0J3 134 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 KRT39Q6A163 491 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 SCARA5Q6ZMJ2 495 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 HTR3DQ70Z44 454 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 ACOT1Q86TX2 421 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 UNC93AQ86WB7 457 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 TMEM25Q86YD3 366 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 FRMD1Q8N878 549 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 ZNF513Q8N8E2 541 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 NAT16Q8N8M0 369 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 EEF2KMTQ96G04 330 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 NUSAP1Q9BXS6 441 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 NACA2Q9H009 215 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 ZDHHC4Q9NPG8 344 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 TMEM74BQ9NUR3 256 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 CTNND2Q9UQB3 1225 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 CHD8Q9HCK8 2581 aa18.51■□□□□ 0.55
SHKBP1-203ENST00000594298 GREM1O60565 184 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 BEST1O76090 585 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 MBD3O95983 291 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 TRIM49P0CI25 452 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 TRIM49CP0CI26 452 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 ANO4Q32M45 955 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 CCDC40Q4G0X9 1142 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 TCERG1LQ5VWI1 586 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 LYSMD4Q5XG99 296 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 TTI2Q6NXR4 508 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 SLC23A3Q6PIS1 610 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 PGBD3Q8N328 593 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 SLC2A14Q8TDB8 520 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 WBP2Q969T9 261 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 CYLDQ9NQC7 956 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 TLR8Q9NR97 1041 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 DACH1Q9UI36 760 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 PILRBQ9UKJ0 227 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 HCN2Q9UL51 889 aa18.5■□□□□ 0.55
SHKBP1-203ENST00000594298 LAMA1P25391 3075 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 AP5Z1O43299 807 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 CACNG3O60359 315 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 HLA-DRAP01903 254 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 CCDC130P13994 396 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 GABRG2P18507 467 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 TRIM21P19474 475 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 NTSR1P30989 418 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 PGFP49763 221 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 NDST1P52848 882 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 PPP3CAQ08209 521 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 C10orf76Q5T2E6 689 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 SLC36A4Q6YBV0 504 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 ARMCX6Q7L4S7 300 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 ELMO3Q96BJ8 720 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 KLF16Q9BXK1 252 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 MMRN2Q9H8L6 949 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 MARK1Q9P0L2 795 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 RWDD2AQ9UIY3 292 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 SCML2Q9UQR0 700 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 USP24Q9UPU5 2620 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 ABCA7Q8IZY2 2146 aa18.49■□□□□ 0.55
SHKBP1-203ENST00000594298 A0A1W2PQF6 199 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 ASS1P00966 412 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 ENGP17813 658 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 ASPAP45381 313 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 MXI1P50539 228 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 STX17P56962 302 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 MAP3K7CLP57077 242 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 FOXC1Q12948 553 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 UAP1L1Q3KQV9 507 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 DCAF17Q5H9S7 520 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 GRAMD4Q6IC98 578 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 KLHDC10Q6PID8 442 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 UNQ6494/PRO21346Q6UXR6 183 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 CEP76Q8TAP6 659 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 TMEM121BQ9BXQ6 578 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 DNAI2Q9GZS0 605 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 CD248Q9HCU0 757 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 PNPLA8Q9NP80 782 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 HMGXB4Q9UGU5 601 aa18.48■□□□□ 0.55
SHKBP1-203ENST00000594298 NUP205Q92621 2012 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 UPK3BL1B0FP48 263 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 C1QTNF9BB2RNN3 333 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 UPK3BL2E5RIL1 263 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 TRIM24O15164 1050 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 C1QTNF9P0C862 333 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 FAM200BP0CF97 657 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 IRF1P10914 325 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 HOXB2P14652 356 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 ITPKAP23677 461 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 ATP5C1P36542 298 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 GOLGA8FQ08AF8 430 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 GOLGA8DPQ0D2H9 430 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 INCA1Q0VD86 236 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 ORC1Q13415 861 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 MIB1Q86YT6 1006 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 C12orf29Q8N999 325 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 KDF1Q8NAX2 398 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms