RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CHP1Q99653 195 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 C11orf70Q9BRQ4 267 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 KCNH6Q9H252 994 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 LIMD1Q9UGP4 676 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 ARHGAP26Q9UNA1 814 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 A0A087X0T9 212 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 TMCO5BA8MYB1 307 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 NRG2O14511 850 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-220ENST00000588917 FAM228BP0C875 321 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 PGFP49763 221 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 PTP4A2Q12974 167 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 ASTE1Q2TB18 679 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-220ENST00000588917 C10orf76Q5T2E6 689 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 FAM102AQ5T9C2 384 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-220ENST00000588917 HFE2Q6ZVN8 426 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 MON1BQ7L1V2 547 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 OLIG1Q8TAK6 271 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 EDEM1Q92611 657 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 SLC22A12Q96S37 553 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 THG1LQ9NWX6 298 aaKnown RBP20.47■□□□□ 0.87
CIRBP-220ENST00000588917 TJP2Q9UDY2 1190 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 NOTCH4Q99466 2003 aa20.47■□□□□ 0.87
CIRBP-220ENST00000588917 TRIOO75962 3097 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 ANKRD62A6NC57 917 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 KRT3P12035 628 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 TCF3P15923 654 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 NOS2P35228 1153 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 CYLC1P35663 651 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-220ENST00000588917 TANGO2Q6ICL3 276 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 MFSD6LQ8IWD5 586 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 C3orf20Q8ND61 904 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 DEPDC1BQ8WUY9 529 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 EDAQ92838 391 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 USP13Q92995 863 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-220ENST00000588917 SELENOOQ9BVL4 669 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 KCNK12Q9HB15 430 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 MRPL47Q9HD33 250 aaKnown RBP20.46■□□□□ 0.87
CIRBP-220ENST00000588917 PARVAQ9NVD7 372 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 MARCH2Q9P0N8 246 aa20.46■□□□□ 0.87
CIRBP-220ENST00000588917 DENND4AQ7Z401 1863 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 SIGLEC16A6NMB1 481 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 GOLGA8SH3BPF8 625 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 TBX18O95935 607 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 FECHP22830 423 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 GBP1P32455 592 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 MATKP42679 507 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 EFEMP1Q12805 493 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 HTR4Q13639 388 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 C2CD6Q53TS8 623 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 DCAF6Q58WW2 860 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 MSANTD2Q6P1R3 559 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 POTEHQ6S545 545 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 PARM1Q6UWI2 310 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 SLC2A13Q96QE2 648 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 BAG1Q99933 345 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-220ENST00000588917 LUC7LQ9NQ29 371 aaKnown RBP20.45■□□□□ 0.86
CIRBP-220ENST00000588917 TAS2R14Q9NYV8 317 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.45■□□□□ 0.86
CIRBP-220ENST00000588917 STAP1Q9ULZ2 295 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 HBS1LQ9Y450 684 aaKnown RBP20.45■□□□□ 0.86
CIRBP-220ENST00000588917 CPQQ9Y646 472 aa20.45■□□□□ 0.86
CIRBP-220ENST00000588917 HEPACAM2A8MVW5 462 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 NRDCO43847 1150 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 FYNP06241 537 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 DESP17661 470 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 RNASE9P60153 205 aaKnown RBP20.44■□□□□ 0.86
CIRBP-220ENST00000588917 GPC5P78333 572 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 GFPT1Q06210 699 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-220ENST00000588917 TAF5Q15542 800 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 CC2D1AQ6P1N0 951 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-220ENST00000588917 DNAJC24Q6P3W2 148 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 YAF2Q8IY57 180 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 DEFB106AQ8N104 65 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 BPIFB1Q8TDL5 484 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 FGF14Q92915 247 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 KLF16Q9BXK1 252 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-220ENST00000588917 RASAL2Q9UJF2 1139 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 TMEM59LQ9UK28 342 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 NUDT5Q9UKK9 219 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 NAALADL1Q9UQQ1 740 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 NUMBLQ9Y6R0 609 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 SCINQ9Y6U3 715 aa20.44■□□□□ 0.86
CIRBP-220ENST00000588917 ZNF638Q14966 1978 aaKnown RBP20.43■□□□□ 0.86
CIRBP-220ENST00000588917 LEFTY2O00292 366 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 DAB1O75553 588 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 IPO7O95373 1038 aaKnown RBP20.43■□□□□ 0.86
CIRBP-220ENST00000588917 PSMC3P17980 439 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 FCARP24071 287 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 VIPR2P41587 438 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 NNTQ13423 1086 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 TDGQ13569 410 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 SPA17Q15506 151 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 ALYREFQ86V81 257 aaKnown RBP20.43■□□□□ 0.86
CIRBP-220ENST00000588917 MIB1Q86YT6 1006 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 SH3RF2Q8TEC5 729 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 SERPINB11Q96P15 392 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 DDX23Q9BUQ8 820 aaKnown RBP20.43■□□□□ 0.86
CIRBP-220ENST00000588917 TRMT61BQ9BVS5 477 aaKnown RBP20.43■□□□□ 0.86
CIRBP-220ENST00000588917 DCLK3Q9C098 648 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 CNOT8Q9UFF9 292 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms