RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 R3HDM2Q9Y2K5 976 aaKnown RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 SYNJ2BP-COX16A0A087WUM0 186 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 ESYT3A0FGR9 886 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 ZNF487B1APH4 448 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 C2CD2LO14523 706 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 ADAM12O43184 909 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 ECEL1O95672 775 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 RPL17P18621 184 aaKnown RBP11.88□□□□□ -0.51
SMAD4-205ENST00000588745 OR1D2P34982 312 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 AIF1P55008 147 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
SMAD4-205ENST00000588745 CCNG2Q16589 344 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 SDHAF4Q5VUM1 108 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 TMCO3Q6UWJ1 677 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 DENND5BQ6ZUT9 1274 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 TAC4Q86UU9 113 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 RFX6Q8HWS3 928 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 PSTKQ8IV42 348 aaKnown RBP11.88□□□□□ -0.51
SMAD4-205ENST00000588745 CCDC105Q8IYK2 499 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 DQX1Q8TE96 717 aaKnown RBP11.88□□□□□ -0.51
SMAD4-205ENST00000588745 CASKIN2Q8WXE0 1202 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 HERVK_113Q902F9 699 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 EDEM1Q92611 657 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 SLCO2A1Q92959 643 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 NTAN1Q96AB6 310 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 FAF2Q96CS3 445 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 SPATA17Q96L03 361 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 TRIM51Q9BSJ1 452 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 HTATIP2Q9BUP3 242 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 RAB17Q9H0T7 212 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 FBXO44Q9H4M3 255 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 EPB41L5Q9HCM4 733 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 ABCC13Q9NSE7 274 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 PIGVQ9NUD9 493 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 DDIT4Q9NX09 232 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 IL37Q9NZH6 218 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 COX16Q9P0S2 106 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 AFF4Q9UHB7 1163 aaKnown RBP11.88□□□□□ -0.51
SMAD4-205ENST00000588745 FZD10Q9ULW2 581 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 SCML2Q9UQR0 700 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 SLC27A5Q9Y2P5 690 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 PCDHB12Q9Y5F1 795 aa11.88□□□□□ -0.51
SMAD4-205ENST00000588745 FAM92AA1XBS5 289 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 APOC4-APOC2K7ER74 178 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 LIASO43766 372 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 CST8O60676 142 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 SOAT2O75908 522 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 RTN3O95197 1032 aaPredicted RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 F9P00740 461 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 APOC2P02655 101 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 LINC00271P0C7V0 271 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 MYBL2P10244 700 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 SYN1P17600 705 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 L1CAMP32004 1257 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 KCNJ1P48048 391 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 USP46P62068 366 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 DYNLT1P63172 113 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 DUSP4Q13115 394 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 NME3Q13232 169 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 SNX1Q13596 522 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 TFDP2Q14188 446 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 MAP9Q49MG5 647 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 DRICH1Q6PGQ1 229 aaPredicted RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 CCNI2Q6ZMN8 369 aaPredicted RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 SCD5Q86SK9 330 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 HERC6Q8IVU3 1022 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 GSPT2Q8IYD1 628 aaKnown RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 GPR65Q8IYL9 337 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 ARHGAP18Q8N392 663 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 ADAM32Q8TC27 787 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 GRK7Q8WTQ7 553 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 SEC14L1Q92503 715 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 KCTD15Q96SI1 283 aaPredicted RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 HINFPQ9BQA5 517 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 CLSTN3Q9BQT9 956 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 ZBED2Q9BTP6 218 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 FRMD8P1Q9BZ68 369 aaPredicted RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 DHX35Q9H5Z1 703 aaKnown RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 WDR6Q9NNW5 1121 aaKnown RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 ARFGAP3Q9NP61 516 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 COMMD8Q9NX08 183 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 MTMR10Q9NXD2 777 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 UTP11Q9Y3A2 253 aaKnown RBP11.87□□□□□ -0.51
SMAD4-205ENST00000588745 INSL6Q9Y581 213 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 SLC4A7Q9Y6M7 1214 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 GREB1Q4ZG55 1949 aa11.87□□□□□ -0.51
SMAD4-205ENST00000588745 A0A1W2PQH9 124 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 SEC31AO94979 1220 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 IGLV3-25P01717 112 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 ATF6P18850 670 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 IL4RP24394 825 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 RBM10P98175 930 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 CREMQ03060 361 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 SCAPQ12770 1279 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms