RNA–Protein interactions for RNA: ENST00000588629.1

ATP6V0A1-218, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 1,797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-218ENST00000588629 TLR8Q9NR97 1041 aaKnown RBP20.27■□□□□ 0.84
ATP6V0A1-218ENST00000588629 RRN3Q9NYV6 651 aa20.27■□□□□ 0.84
ATP6V0A1-218ENST00000588629 EHD2Q9NZN4 543 aa20.27■□□□□ 0.84
ATP6V0A1-218ENST00000588629 NUDT5Q9UKK9 219 aa20.27■□□□□ 0.84
ATP6V0A1-218ENST00000588629 SYNJ2BP-COX16A0A087WUM0 186 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CES2O00748 559 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 NME3Q13232 169 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PLD1Q13393 1074 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TUBB2AQ13885 445 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 SCYL2Q6P3W7 929 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TAC4Q86UU9 113 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 KATNAL2Q8IYT4 538 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PGAP3Q96FM1 320 aaPredicted RBP20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TRMT2BQ96GJ1 504 aaKnown RBP20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TUBB2BQ9BVA1 445 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 LMAN2LQ9H0V9 348 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PIGVQ9NUD9 493 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CLIC5Q9NZA1 410 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 SMARCAL1Q9NZC9 954 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 COX16Q9P0S2 106 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RFXAPO00287 272 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PDE2AO00408 941 aaPredicted RBP20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PRPSAP2O60256 369 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CEP104O60308 925 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 IGLV3-25P01717 112 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 KRT7P08729 469 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 EPCAMP16422 314 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RDXP35241 583 aaKnown RBP20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PSEN1P49768 467 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 DEUP1Q05D60 604 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RBM23Q86U06 439 aaKnown RBP20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 FAM131BQ86XD5 332 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 SLC22A17Q8WUG5 538 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 NCAPGQ9BPX3 1015 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 MAN1C1Q9NR34 630 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 DDIT4Q9NX09 232 aa20.26■□□□□ 0.83
ATP6V0A1-218ENST00000588629 LRG1P02750 347 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RARAP10276 462 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TAF12Q16514 161 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 WHAMMP3Q1A5X7 153 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RASGEF1CQ8N431 466 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 OVCA2Q8WZ82 227 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CASP10Q92851 521 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ZNF512Q96ME7 567 aaPredicted RBP20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 SMOC2Q9H3U7 446 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 FAM204AQ9H8W3 233 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ZNF334Q9HCZ1 680 aaPredicted RBP20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 WDR6Q9NNW5 1121 aaKnown RBP20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 SFMBT1Q9UHJ3 866 aa20.25■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TADA3O75528 432 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 C1RP00736 705 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RARGP13631 454 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 EIF4EBP2Q13542 120 aaPredicted RBP20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ZFYVE27Q5T4F4 411 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RSRC2Q7L4I2 434 aaKnown RBP20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ANKS1BQ7Z6G8 1248 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ITIH5Q86UX2 942 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CCDC185Q8N715 623 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PDZD8Q8NEN9 1154 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RNF139Q8WU17 664 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RAPGEF5Q92565 580 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 HCFC2Q9Y5Z7 792 aa20.24■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RIOK3O14730 519 aaKnown RBP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ZRANB2O95218 330 aaKnown RBP eCLIP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 KRT1P04264 644 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PPM1LQ5SGD2 360 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 SNX30Q5VWJ9 437 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 MSANTD2Q6P1R3 559 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 EXD1Q8NHP7 514 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ACTRT1Q8TDG2 376 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 HSPH1Q92598 858 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 SNRNP25Q9BV90 132 aaKnown RBP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PLEKHA4Q9H4M7 779 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 DDX56Q9NY93 547 aaKnown RBP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ASB3Q9Y575 518 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 ZNF840PA6NDX5 716 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 PI4K2BG5E9Z4 385 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 IRAK2O43187 625 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 MSI1O43347 362 aaKnown RBP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RFPL2O75678 378 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TBX18O95935 607 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RALAP11233 206 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 LLGL1Q15334 1064 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 BOLA3Q53S33 107 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TMEM150AQ86TG1 271 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CMASQ8NFW8 434 aaPredicted RBP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 RNF25Q96BH1 459 aaPredicted RBP20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CARD6Q9BX69 1037 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CCSER2Q9H7U1 834 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 IL21Q9HBE4 155 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 GPATCH2LQ9NWQ4 482 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TRANK1O15050 2925 aa20.23■□□□□ 0.83
ATP6V0A1-218ENST00000588629 MTCL1Q9Y4B5 1905 aaKnown RBP20.22■□□□□ 0.83
ATP6V0A1-218ENST00000588629 MYO7AQ13402 2215 aa20.22■□□□□ 0.83
ATP6V0A1-218ENST00000588629 C3orf70A6NLC5 250 aaPredicted RBP20.22■□□□□ 0.83
ATP6V0A1-218ENST00000588629 MDM4O15151 490 aa20.22■□□□□ 0.83
ATP6V0A1-218ENST00000588629 CCL16O15467 120 aa20.22■□□□□ 0.83
ATP6V0A1-218ENST00000588629 TLR5O60602 858 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms