RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRABDQ9H4I3 376 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 DHX33Q9H6R0 707 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 NFASCO94856 1347 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 COL4A5P29400 1685 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 LIASO43766 372 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 CST8O60676 142 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TOM1L1O75674 476 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PGK2P07205 417 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 CTSBP07858 339 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 KRT3P12035 628 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 MMP8P22894 467 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 RPS12P25398 132 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 POLR2BP30876 1174 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 ARL2P36404 184 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TGFB2P61812 414 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 BASP1P80723 227 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 HADHQ16836 314 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 CENPUQ71F23 418 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 BRSK2Q8IWQ3 736 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PALM2Q8IXS6 379 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 REPS2Q8NFH8 660 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PYROXD1Q8WU10 500 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 SLCO2A1Q92959 643 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 ANKRD36BP1Q96IX9 119 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 VCPIP1Q96JH7 1222 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 SLITRK1Q96PX8 696 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TJP2Q9UDY2 1190 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 GINS2Q9Y248 185 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 ARL2BPQ9Y2Y0 163 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TMEM191CA6NGB0 347 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 FAM47DPA6NHR8 397 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 DNALI1O14645 258 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 OGTO15294 1046 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TP73O15350 636 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 CAPN5O15484 640 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 BPNT1O95861 308 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 ASS1P00966 412 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 GHRP10912 638 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 RFC1P35251 1148 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 ALDH5A1P51649 535 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 OAZ1P54368 228 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 ZNF280AP59817 542 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 KCNJ2P63252 427 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 OTUD4Q01804 1114 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 OGDHQ02218 1023 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 KLF1Q13351 362 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 NEDD9Q14511 834 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 SETDB1Q15047 1291 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PKN2Q16513 984 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 CDO1Q16878 200 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 SGSM1Q2NKQ1 1148 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 LACTB2Q53H82 288 aaPredicted RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 ZNF667Q5HYK9 610 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 DENND1BQ6P3S1 775 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 SCYL2Q6P3W7 929 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 CEP128Q6ZU80 1094 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TMEM130Q8N3G9 435 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 ACTL9Q8TC94 416 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 LRRC8CQ8TDW0 803 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 CKAP2Q8WWK9 683 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TFAP2BQ92481 460 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 NKD1Q969G9 470 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TACO1Q9BSH4 297 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.6□□□□□ -1.51
VAPA-203ENST00000577539 IGF2BP3O00425 579 aaKnown RBP eCLIP5.59□□□□□ -1.51
VAPA-203ENST00000577539 RNF8O76064 485 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 NFKB1P19838 968 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 SSTR1P30872 391 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 NTF4P34130 210 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 CLCN3P51790 818 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 EFNA5P52803 228 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 ELF3P78545 371 aaPredicted RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 POU5F1BQ06416 359 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 LAMTOR4Q0VGL1 99 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 LAMC2Q13753 1193 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 SPARCL1Q14515 664 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 LBRQ14739 615 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 CBX2Q14781 532 aaPredicted RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 MAPRE1Q15691 268 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 ARSJQ5FYB0 599 aaPredicted RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 TFDP3Q5H9I0 405 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 EEF1DP3Q658K8 133 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 ZC3H18Q86VM9 953 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 ZCCHC9Q8N567 271 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 KCTD6Q8NC69 237 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 CCHCR1Q8TD31 782 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 MAK16Q9BXY0 300 aaKnown RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 VPS33BQ9H267 617 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 AGAP1Q9UPQ3 857 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 AFG3L2Q9Y4W6 797 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 IKBKGQ9Y6K9 419 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 CNTNAP2Q9UHC6 1331 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 B4GALT5O43286 388 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 GRAP2O75791 330 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 DNAJC8O75937 253 aaPredicted RBP5.59□□□□□ -1.51
VAPA-203ENST00000577539 CXCL8P10145 99 aa5.59□□□□□ -1.51
VAPA-203ENST00000577539 CTCFP49711 727 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms