RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 DNAJC12Q9UKB3 198 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 SDK1Q7Z5N4 2213 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.49■□□□□ 0.23
USB1-208ENST00000563207 COCHO43405 550 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 CBFA2T2O43439 604 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 MBL2P11226 248 aaPredicted RBP16.49■□□□□ 0.23
USB1-208ENST00000563207 YWHAQP27348 245 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 ZNF132P52740 706 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 SF3A2Q15428 464 aaKnown RBP16.49■□□□□ 0.23
USB1-208ENST00000563207 SGO2Q562F6 1265 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 C2orf27AQ580R0 203 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 EMC10Q5UCC4 262 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 ARHGAP17Q68EM7 881 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 RHBDF2Q6PJF5 856 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 GPRIN1Q7Z2K8 1008 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 SLC2A14Q8TDB8 520 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 GAB3Q8WWW8 586 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 FBXO32Q969P5 355 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 NAP1L5Q96NT1 182 aaPredicted RBP16.49■□□□□ 0.23
USB1-208ENST00000563207 NAA15Q9BXJ9 866 aaKnown RBP16.49■□□□□ 0.23
USB1-208ENST00000563207 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 KRT82Q9NSB4 513 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 GMIPQ9P107 970 aa16.49■□□□□ 0.23
USB1-208ENST00000563207 TEX33O43247 280 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 RPP40O75818 363 aaKnown RBP16.48■□□□□ 0.23
USB1-208ENST00000563207 AP1G2O75843 785 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 CHRM1P11229 460 aaPredicted RBP16.48■□□□□ 0.23
USB1-208ENST00000563207 HNRNPLP14866 589 aaKnown RBP eCLIP16.48■□□□□ 0.23
USB1-208ENST00000563207 CNR2P34972 360 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 SLC5A3P53794 718 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 BPIFB4P59827 614 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 LMNB2Q03252 620 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 DMC1Q14565 340 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 DHCR24Q15392 516 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 ARHGAP44Q17R89 818 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 GJB7Q6PEY0 223 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 PRR23CQ6ZRP0 262 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 CCDC33Q8N5R6 958 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 GPR161Q8N6U8 529 aaKnown RBP16.48■□□□□ 0.23
USB1-208ENST00000563207 RBBP8NLQ8NC74 664 aaPredicted RBP16.48■□□□□ 0.23
USB1-208ENST00000563207 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 SLITRK1Q96PX8 696 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 GANQ9H2C0 597 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 FAM207AQ9NSI2 230 aaPredicted RBP16.48■□□□□ 0.23
USB1-208ENST00000563207 IL37Q9NZH6 218 aa16.48■□□□□ 0.23
USB1-208ENST00000563207 ATG13O75143 517 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 NFATC1O95644 943 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 TBX18O95935 607 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 KRT5P13647 590 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 ADORA2BP29275 332 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 MAP3K7CLP57077 242 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 SLC8A3P57103 927 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 AMPD2Q01433 879 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 APBA1Q02410 837 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 DRAP1Q14919 205 aaPredicted RBP16.47■□□□□ 0.23
USB1-208ENST00000563207 CNGA2Q16280 664 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 CSRP2Q16527 193 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 SYT13Q7L8C5 426 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 FAM71AQ8IYT1 594 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 USP33Q8TEY7 942 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 NUP58Q9BVL2 599 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 EDEM3Q9BZQ6 932 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 CSNK1G1Q9HCP0 422 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 PNPLA8Q9NP80 782 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 DMAP1Q9NPF5 467 aaPredicted RBP16.47■□□□□ 0.23
USB1-208ENST00000563207 OSER1Q9NX31 292 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 IFNKQ9P0W0 207 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 CDV3Q9UKY7 258 aaKnown RBP16.47■□□□□ 0.23
USB1-208ENST00000563207 FHOD1Q9Y613 1164 aa16.47■□□□□ 0.23
USB1-208ENST00000563207 SPAG17Q6Q759 2223 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 RNF225M0QZC1 329 aaPredicted RBP16.46■□□□□ 0.23
USB1-208ENST00000563207 FOXN3O00409 490 aaPredicted RBP16.46■□□□□ 0.23
USB1-208ENST00000563207 TRIM24O15164 1050 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 MED7O43513 233 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 ZDHHC11BP0C7U3 371 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 IRF1P10914 325 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 CD19P15391 556 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 PPP3CCP48454 512 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 POLR2FP61218 127 aaKnown RBP16.46■□□□□ 0.23
USB1-208ENST00000563207 PTK2Q05397 1052 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 KDSRQ06136 332 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 NR1H3Q13133 447 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 MEA1Q16626 185 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 FIGNQ5HY92 759 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 PPP1R26Q5T8A7 1209 aaPredicted RBP16.46■□□□□ 0.23
USB1-208ENST00000563207 SARM1Q6SZW1 724 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 NAT16Q8N8M0 369 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 ANKRD52Q8NB46 1076 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 DUSP16Q9BY84 665 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 TPSD1Q9BZJ3 242 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 UBXN6Q9BZV1 441 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 COMMD8Q9NX08 183 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 HESX1Q9UBX0 185 aa16.46■□□□□ 0.23
USB1-208ENST00000563207 NUDT5Q9UKK9 219 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms