RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 OR4Q2P0C623 313 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 NCAM1P13591 858 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 CPB1P15086 417 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 ATF2P15336 505 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 LAG3P18627 525 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 CYP2F1P24903 491 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 ARL4AP40617 200 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 SLC5A3P53794 718 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 RPL10AP62906 217 aaKnown RBP14.34□□□□□ -0.11
TPM1-215ENST00000558868 DYNLT1P63172 113 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 ADCY2Q08462 1091 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 GPR17Q13304 367 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 MTMR3Q13615 1198 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 ANKRD20A8PQ5CZ79 823 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 EFHC2Q5JST6 749 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 SPOUT1Q5T280 376 aaKnown RBP14.34□□□□□ -0.11
TPM1-215ENST00000558868 BSPRYQ5W0U4 402 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 ALS2CLQ60I27 953 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 DDX42Q86XP3 938 aaKnown RBP eCLIP14.34□□□□□ -0.11
TPM1-215ENST00000558868 KRT222Q8N1A0 295 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 NUP93Q8N1F7 819 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 SLC35B2Q8TB61 432 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 P3H4Q92791 437 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 TRIM43Q96BQ3 446 aaPredicted RBP14.34□□□□□ -0.11
TPM1-215ENST00000558868 FAF2Q96CS3 445 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 SNF8Q96H20 258 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 CEP295NLQ96MC4 621 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 FMO2Q99518 471 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 DHX35Q9H5Z1 703 aaKnown RBP14.34□□□□□ -0.11
TPM1-215ENST00000558868 CWH43Q9H720 699 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 ABCC13Q9NSE7 274 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 FAM53CQ9NYF3 392 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 STK39Q9UEW8 545 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 DNPEPQ9ULA0 475 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 FZD10Q9ULW2 581 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 PTPRDP23468 1912 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.11
TPM1-215ENST00000558868 H3BRJ5 948 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 TNFRSF10BO14763 440 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 RRP9O43818 475 aaKnown RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 TBC1D4O60343 1298 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 ZNF189O75820 626 aaPredicted RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 SASH3O75995 380 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 RTN3O95197 1032 aaPredicted RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 KRT14P02533 472 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 FYNP06241 537 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 CSF2RAP15509 400 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 TFE3P19532 575 aaPredicted RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 ECHS1P30084 290 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 L1CAMP32004 1257 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 HSPA9P38646 679 aaKnown RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 RPL21P46778 160 aaKnown RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.12
TPM1-215ENST00000558868 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 NME3Q13232 169 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 TRADDQ15628 312 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 OASLQ15646 514 aaKnown RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 RAB6CQ53S08 254 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 ZC3H12AQ5D1E8 599 aaKnown RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 SPDYCQ5MJ68 293 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 SYPL2Q5VXT5 272 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 BTBD8Q5XKL5 378 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 CEP128Q6ZU80 1094 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 HFE2Q6ZVN8 426 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 BZW1Q7L1Q6 419 aaKnown RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 FAM131BQ86XD5 332 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 ALLCQ8N6M5 410 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 ACTL9Q8TC94 416 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
TPM1-215ENST00000558868 IGSF21Q96ID5 467 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 RAB6CQ9H0N0 254 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 FAM204AQ9H8W3 233 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 IL23AQ9NPF7 189 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 GPATCH2LQ9NWQ4 482 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 PRKAG2Q9UGJ0 569 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 HPCAL4Q9UM19 191 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 SCML2Q9UQR0 700 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 DNAH12Q6ZR08 3092 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 LTBP2Q14767 1821 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 PATJQ8NI35 1801 aa14.33□□□□□ -0.12
TPM1-215ENST00000558868 CFAP69A5D8W1 941 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 NT5C1B-RDH14C9J2C7 533 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 EFEMP2O95967 443 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 ADCY8P40145 1251 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 NR2C2P49116 596 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 RABGGTBP53611 331 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 PLTPP55058 493 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 ARPP19P56211 112 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 EIF3EP60228 445 aaKnown RBP14.32□□□□□ -0.12
TPM1-215ENST00000558868 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
TPM1-215ENST00000558868 SCAPQ12770 1279 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 MMRN1Q13201 1228 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 PPIGQ13427 754 aaKnown RBP eCLIP14.32□□□□□ -0.121e-17■□□□□ 11.3
TPM1-215ENST00000558868 NOMO1Q15155 1222 aa14.32□□□□□ -0.12
TPM1-215ENST00000558868 HSP90B2PQ58FF3 399 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms