RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 TARSL2A2RTX5 802 aaKnown RBP14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 POMCP01189 267 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 THP07101 528 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 CTNNA2P26232 953 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 RPL9P32969 192 aaKnown RBP14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 MAN1A1P33908 653 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 OR1G1P47890 313 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 NOVA1P51513 510 aaKnown RBP14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 ZNF252P-AS1Q0IIN9 211 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 GLE1Q53GS7 698 aaKnown RBP14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 TEX35Q5T0J7 233 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 PLEKHA7Q6IQ23 1121 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 LONP2Q86WA8 852 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 MMGT1Q8N4V1 131 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 TOP6BLQ8N6T0 577 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 DNASE1L2Q92874 299 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 B3GALT6Q96L58 329 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 UROC1Q96N76 676 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 PPP1R10Q96QC0 940 aaKnown RBP14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 MMS19Q96T76 1030 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 SMYD3Q9H7B4 428 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 RSAD1Q9HA92 442 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 LMAN1LQ9HAT1 526 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 ACP6Q9NPH0 428 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 CHST7Q9NS84 486 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 FNIP2Q9P278 1114 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 POLIQ9UNA4 740 aa14.97□□□□□ -0.01
TRAPPC6B-206ENST00000556765 KPNA7A9QM74 516 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 CCDC188H7C350 402 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 MYO1FO00160 1098 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 AXIN1O15169 862 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 ECI2O75521 394 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 HNRNPA1P09651 372 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 CD19P15391 556 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 RPL17P18621 184 aaKnown RBP14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 AKAP5P24588 427 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 BRD2P25440 801 aaKnown RBP14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 ELF2Q15723 593 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 ERCC6LQ2NKX8 1250 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 LIMS2Q7Z4I7 341 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 ERICH1Q86X53 443 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 NPAS3Q8IXF0 933 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 RASGEF1CQ8N431 466 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 SLC4A11Q8NBS3 891 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 DDX27Q96GQ7 796 aaKnown RBP14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 APOL6Q9BWW8 343 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 PLA2G2FQ9BZM2 168 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 CYLDQ9NQC7 956 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 TUBGCP4Q9UGJ1 667 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 HES2Q9Y543 173 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 ALG6Q9Y672 507 aa14.96□□□□□ -0.01
TRAPPC6B-206ENST00000556765 F8W810 466 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 PGRMC1O00264 195 aaKnown RBP14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 KCNK3O14649 394 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 GIPC1O14908 333 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 CCL16O15467 120 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 HUS1O60921 280 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 TOP3BO95985 862 aaKnown RBP14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 GRIK3Q13003 919 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 SOWAHCQ53LP3 525 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 HEATR6Q6AI08 1181 aaKnown RBP14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 LCLAT1Q6UWP7 414 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 COLGALT2Q8IYK4 626 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 TMEM86AQ8N2M4 240 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 C3orf20Q8ND61 904 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 APPL2Q8NEU8 664 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 IPO4Q8TEX9 1081 aaKnown RBP14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 WHAMMQ8TF30 809 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 CPA5Q8WXQ8 436 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 TNIP3Q96KP6 325 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 SDCBP2Q9H190 292 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 ANAPC7Q9UJX3 599 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 FBXW11Q9UKB1 542 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 SNX9Q9Y5X1 595 aa14.95□□□□□ -0.02
TRAPPC6B-206ENST00000556765 O00370 1275 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 SPOPO43791 374 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 SRGAP2O75044 1071 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 XYLBO75191 536 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 ERLIN1O75477 346 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 WARSP23381 471 aaKnown RBP14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 NDST1P52848 882 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 CREMQ03060 361 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 PTP4A2Q12974 167 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 GAS6Q14393 721 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 ZNF268Q14587 947 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 BRD3Q15059 726 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 USP41Q3LFD5 358 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 ZNF394Q53GI3 561 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 PPM1LQ5SGD2 360 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 SEL1L2Q5TEA6 688 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 RNF43Q68DV7 783 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 ARHGAP17Q68EM7 881 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 GPR65Q8IYL9 337 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 SPATA4Q8NEY3 305 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 FNIP1Q8TF40 1166 aa14.94□□□□□ -0.02
TRAPPC6B-206ENST00000556765 COG1Q8WTW3 980 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms