RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 KRT3P12035 628 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 COMTP21964 271 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 HOXC13P31276 330 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 NOS2P35228 1153 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 PTPN7P35236 360 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SPA17Q15506 151 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 MGAT5BQ3V5L5 792 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 FAM102AQ5T9C2 384 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 BSPRYQ5W0U4 402 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 MON1AQ86VX9 555 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SLC35F6Q8N357 371 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 RASGEF1CQ8N431 466 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TCEAL4Q96EI5 215 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SEPT5Q99719 369 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 MIS12Q9H081 205 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 FBXO44Q9H4M3 255 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 PRDM12Q9H4Q4 367 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 CCSER2Q9H7U1 834 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 CYP4F11Q9HBI6 524 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 CDH22Q9UJ99 828 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TCF20Q9UGU0 1960 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ZSCAN12O43309 604 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 COCHO43405 550 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 GRAP2O75791 330 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 TRUB2O95900 331 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ATP1A1P05023 1023 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 GPD1P21695 349 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 KLRC2P26717 231 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ARPP19P56211 112 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 YWHAZP63104 245 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 PLD1Q13393 1074 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 EFHC1Q5JVL4 640 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 STXBP5Q5T5C0 1151 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 KIAA1841Q6NSI8 718 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 DNAJC24Q6P3W2 148 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CCDC185Q8N715 623 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 DQX1Q8TE96 717 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CTNNBL1Q8WYA6 563 aaPredicted RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 MYEOVQ96EZ4 313 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 RRAGDQ9NQL2 400 aaPredicted RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 TMPRSS4Q9NRS4 437 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ANAPC7Q9UJX3 599 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 FZD10Q9ULW2 581 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CEP83Q9Y592 693 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 PCDHA3Q9Y5H8 950 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ALG6Q9Y672 507 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 MYO7AQ13402 2215 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 PRRC2BQ5JSZ5 2229 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ESPNB1AK53 854 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 BHMG1C9JSJ3 638 aaPredicted RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 IRAK2O43187 625 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CSH1P0DML2 217 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CSH2P0DML3 217 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 PFKLP17858 780 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 YWHAQP27348 245 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 NRG1Q02297 640 aaPredicted RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 KLF1Q13351 362 aaPredicted RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 TRIP4Q15650 581 aaPredicted RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 LRRC38Q5VT99 294 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 NADSYN1Q6IA69 706 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CCDC149Q6ZUS6 474 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 POLNQ7Z5Q5 900 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 GPR149Q86SP6 731 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 RSPRY1Q96DX4 576 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 KLC2Q9H0B6 622 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 GOLGA6L9A6NEM1 432 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ZNF487B1APH4 448 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CES2O00748 559 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CCL16O15467 120 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 NCK2O43639 380 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CHRM1P11229 460 aaPredicted RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 PPP3CCP48454 512 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 SLC7A9P82251 487 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CA9Q16790 459 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 OR6B2Q6IFH4 312 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 VSIG1Q86XK7 387 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ZSWIM3Q96MP5 696 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 LRRC3BQ96PB8 259 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CNPY3Q9BT09 278 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 SFXN1Q9H9B4 322 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 TRPV4Q9HBA0 871 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 MRPL47Q9HD33 250 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 ABCC13Q9NSE7 274 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 SEPT11Q9NVA2 429 aaKnown RBP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00517-202ENST00000554257 IP6K2Q9UHH9 426 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 LCMT1Q9UIC8 334 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 CKAP5Q14008 2032 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 NUP205Q92621 2012 aa7.06□□□□□ -1.28
LINC00517-202ENST00000554257 IGLV3-10A0A075B6K4 115 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 MACROD2A1Z1Q3 448 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 GOLGA8SH3BPF8 625 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 KRT86O43790 486 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 PRLRP16471 622 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 PSEN1P49768 467 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
LINC00517-202ENST00000554257 KIF5AQ12840 1032 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 PIGHQ14442 188 aaPredicted RBP7.05□□□□□ -1.28
LINC00517-202ENST00000554257 LIN9Q5TKA1 542 aa7.05□□□□□ -1.28
LINC00517-202ENST00000554257 SCN4BQ8IWT1 228 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms