RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 ARMCX3Q9UH62 379 aaPredicted RBP11.31□□□□□ -0.6
PNN-203ENST00000554117 RASAL2Q9UJF2 1139 aa11.31□□□□□ -0.6
PNN-203ENST00000554117 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
PNN-203ENST00000554117 A0A0A0MRY4 1105 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 A0A1W2PQH9 124 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 BCLAF3A2AJT9 711 aaKnown RBP11.3□□□□□ -0.6
PNN-203ENST00000554117 NPC1O15118 1278 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 NDUFS2O75306 463 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 BEST1O76090 585 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 ADRB1P08588 477 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 CD19P15391 556 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 RDXP35241 583 aaKnown RBP11.3□□□□□ -0.6
PNN-203ENST00000554117 BCAT1P54687 386 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 PPP3CAQ08209 521 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 PNOCQ13519 176 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 SGO2Q562F6 1265 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 PPP1R26Q5T8A7 1209 aaPredicted RBP11.3□□□□□ -0.6
PNN-203ENST00000554117 NAIF1Q69YI7 327 aaPredicted RBP11.3□□□□□ -0.6
PNN-203ENST00000554117 MIB1Q86YT6 1006 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 CCDC117Q8IWD4 279 aaPredicted RBP11.3□□□□□ -0.6
PNN-203ENST00000554117 SIX6OS1Q8N1H7 587 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 ZNF276Q8N554 614 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 IL17RCQ8NAC3 791 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 MDGA1Q8NFP4 955 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 ELMO3Q96BJ8 720 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 HMGXB4Q9UGU5 601 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 INVSQ9Y283 1065 aa11.3□□□□□ -0.6
PNN-203ENST00000554117 TYW5A2RUC4 315 aaKnown RBP11.29□□□□□ -0.6
PNN-203ENST00000554117 GDF9O60383 454 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 FGFR1OPO95684 399 aaKnown RBP11.29□□□□□ -0.6
PNN-203ENST00000554117 PRCPP42785 496 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 HARS2P49590 506 aaKnown RBP11.29□□□□□ -0.6
PNN-203ENST00000554117 KIF11P52732 1056 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 ZNF445P59923 1031 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 EFEMP1Q12805 493 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 STILQ15468 1287 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 TMEM25Q86YD3 366 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 ZMIZ2Q8NF64 920 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 CEP76Q8TAP6 659 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 PIGKQ92643 395 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
PNN-203ENST00000554117 PLD4Q96BZ4 506 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 TIGD1Q96MW7 591 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
PNN-203ENST00000554117 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 SLC32A1Q9H598 525 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
PNN-203ENST00000554117 CEP250Q9BV73 2442 aa11.29□□□□□ -0.6
PNN-203ENST00000554117 SGK1O00141 431 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 GFRA2O00451 464 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 DCLK1O15075 740 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 CACNG3O60359 315 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 SYNCRIPO60506 623 aaKnown RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 HOXD12P35452 270 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 ZNF132P52740 706 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 YWHAGP61981 247 aaKnown RBP eCLIP11.28□□□□□ -0.6
PNN-203ENST00000554117 RPL6Q02878 288 aaKnown RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 SYCP2LQ5T4T6 812 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 LYSMD4Q5XG99 296 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 ARHGAP17Q68EM7 881 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 C12orf40Q86WS4 652 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 SYT12Q8IV01 421 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 SMYD4Q8IYR2 804 aaPredicted RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 ZNF557Q8N988 423 aaPredicted RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 ANKRD52Q8NB46 1076 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 DDI1Q8WTU0 396 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 ZFRQ96KR1 1074 aaKnown RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 GOLPH3LQ9H4A5 285 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 APOBEC3GQ9HC16 384 aaKnown RBP11.28□□□□□ -0.6
PNN-203ENST00000554117 MARK1Q9P0L2 795 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 STARD13Q9Y3M8 1113 aa11.28□□□□□ -0.6
PNN-203ENST00000554117 SLC12A8A0AV02 714 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 XPO1O14980 1071 aaKnown RBP11.27□□□□□ -0.61
PNN-203ENST00000554117 GNA14O95837 355 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 TBX18O95935 607 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 ZBED1O96006 694 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 HMBSP08397 361 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 ACADMP11310 421 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 VDRP11473 427 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 GNSP15586 552 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 CORO1AP31146 461 aaKnown RBP11.27□□□□□ -0.61
PNN-203ENST00000554117 P2RY2P41231 377 aa11.27□□□□□ -0.61
PNN-203ENST00000554117 KIR2DL1P43626 348 aaPredicted RBP11.27□□□□□ -0.61
PNN-203ENST00000554117 TKTL1P51854 596 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms