RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 SCN4BQ8IWT1 228 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 TTC9BQ8N6N2 239 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 ACTL9Q8TC94 416 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 FAF2Q96CS3 445 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 PGAP3Q96FM1 320 aaPredicted RBP20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 CCDC114Q96M63 670 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 ZNF670Q9BS34 389 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 ZDHHC18Q9NUE0 388 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 AP4E1Q9UPM8 1137 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 ZNF487B1APH4 448 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 H7C4K7 107 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 APOC4-APOC2K7ER74 178 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 VNN2O95498 520 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 GAS8O95995 478 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 APOC2P02655 101 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 PTK6Q13882 451 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 FAM117BQ6P1L5 589 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 KCNT2Q6UVM3 1135 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 PRSS55Q6UWB4 352 aaPredicted RBP20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 BEND5Q7L4P6 421 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 TTC13Q8NBP0 860 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 SLC7A14Q8TBB6 771 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 EDEM1Q92611 657 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 WDR6Q9NNW5 1121 aaKnown RBP20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 FZD10Q9ULW2 581 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 DRG1Q9Y295 367 aaKnown RBP20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 GPR15P49685 360 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 VCPP55072 806 aaKnown RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 OTUD4Q01804 1114 aaKnown RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 DEUP1Q05D60 604 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 NME3Q13232 169 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 DDR2Q16832 855 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 ANKRD20A8PQ5CZ79 823 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 ZDHHC24Q6UX98 284 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 PSTKQ8IV42 348 aaKnown RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 PQLC3Q8N755 202 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 ADAM32Q8TC27 787 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 OXCT2Q9BYC2 517 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 DHX35Q9H5Z1 703 aaKnown RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 RRN3Q9NYV6 651 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 MTMR11A4FU01 709 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 TRIM66O15016 1216 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 CPB1P15086 417 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 PECAM1P16284 738 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 EN2P19622 333 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 IVDP26440 423 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 PGFP49763 221 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 ARPP19P56211 112 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 TFDP2Q14188 446 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 PPP6R3Q5H9R7 873 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 SDHAF4Q5VUM1 108 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 C16orf59Q7L2K0 433 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 PCDH19Q8TAB3 1148 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 SLC9A7Q96T83 725 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 MAK16Q9BXY0 300 aaKnown RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 FRMD8P1Q9BZ68 369 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 CRISPLD1Q9H336 500 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 PATJQ8NI35 1801 aa20.35■□□□□ 0.85
RBFOX1-215ENST00000553186 SYNJ2BP-COX16A0A087WUM0 186 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 TP73O15350 636 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 BAIAP3O94812 1187 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 ITGAVP06756 1048 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 USP41Q3LFD5 358 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 GLIPR1L2Q4G1C9 344 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 RNF19BQ6ZMZ0 732 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 KCTD15Q96SI1 283 aaPredicted RBP20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 VIPAS39Q9H9C1 493 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 IL23AQ9NPF7 189 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 COX16Q9P0S2 106 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 ZNF148Q9UQR1 794 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 KLRC2P26717 231 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 LMNB2Q03252 620 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 SMARCB1Q12824 385 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 SLC9A4Q6AI14 798 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 SLC8B1Q6J4K2 584 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 SCD5Q86SK9 330 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 CMTR2Q8IYT2 770 aaKnown RBP20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 NUP93Q8N1F7 819 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 PYROXD2Q8N2H3 581 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 ALLCQ8N6M5 410 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 PLD5Q8N7P1 536 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 STKLD1Q8NE28 680 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 TMPRSS4Q9NRS4 437 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 MTRRQ9UBK8 725 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 HPCAL4Q9UM19 191 aa20.34■□□□□ 0.85
RBFOX1-215ENST00000553186 I6L893 689 aaPredicted RBP20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 ADAM12O43184 909 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 LAMA2P24043 3122 aaKnown RBP20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 YWHAGP61981 247 aaKnown RBP eCLIP20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 IFRD2Q12894 506 aaPredicted RBP20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 TRIP13Q15645 432 aaPredicted RBP20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 OTOP2Q7RTS6 562 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 SLC39A11Q8N1S5 342 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 MREGQ8N565 214 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 TSEN2Q8NCE0 465 aaKnown RBP20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 FBXO22Q8NEZ5 403 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 FBXO25Q8TCJ0 367 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 SPPL2BQ8TCT7 592 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 PIK3R5Q8WYR1 880 aa20.33■□□□□ 0.85
RBFOX1-215ENST00000553186 MCOLN1Q9GZU1 580 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms