RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 NACA2Q9H009 215 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 GOLPH3LQ9H4A5 285 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 POLMQ9NP87 494 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CYLDQ9NQC7 956 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 TLR8Q9NR97 1041 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 DNAJC17Q9NVM6 304 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 COMMD8Q9NX08 183 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CALCOCO1Q9P1Z2 691 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 SCML2Q9UQR0 700 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 TRAF3IP3Q9Y228 551 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 PLXNB3Q9ULL4 1909 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 DMXL2Q8TDJ6 3036 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CABIN1Q9Y6J0 2220 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 TP53BP1Q12888 1972 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 IKBKBO14920 756 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 HSP90AA1P07900 732 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 FAM200BP0CF97 657 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 RARGP13631 454 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 HOXB2P14652 356 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 NDUFV2P19404 249 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 NR2F2P24468 414 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 NTSR1P30989 418 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 ATP5C1P36542 298 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 KIF11P52732 1056 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 ZNF252P-AS1Q0IIN9 211 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 DPYDQ12882 1025 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 FOXC1Q12948 553 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 HSF5Q4G112 596 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 BTBD8Q5XKL5 378 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 ATL3Q6DD88 541 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 GRAMD4Q6IC98 578 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 Q6ZNB5 142 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 SLC41A1Q8IVJ1 513 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 NDRG1Q92597 394 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 ARID3AQ99856 593 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 CACNA2D2Q9NY47 1150 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 PILRBQ9UKJ0 227 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 STARD13Q9Y3M8 1113 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 PTPRBP23467 1997 aa12.18□□□□□ -0.46
PRPF40B-212ENST00000551111 IGHV1OR15-9A0A0B4J2B8 117 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 CACNG3O60359 315 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 CILPO75339 1184 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 STC2O76061 302 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 RHOBTB3O94955 611 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 KIF20AO95235 890 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 P4HA1P13674 534 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 ENGP17813 658 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 SYKP43405 635 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 FAM193AP78312 1265 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 C10orf120Q5SQS8 335 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 DAB2IPQ5VWQ8 1189 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 C11orf74Q86VG3 221 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 SYT12Q8IV01 421 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 TAF4BQ92750 862 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 TATDN2Q93075 761 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 NT5C1AQ9BXI3 368 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 EVLQ9UI08 416 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 NAGPAQ9UK23 515 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 CYP8B1Q9UNU6 501 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 FRMD4BQ9Y2L6 1034 aa12.17□□□□□ -0.46
PRPF40B-212ENST00000551111 DOCK9Q9BZ29 2069 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 FAM237AA0A1B0GTK4 181 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 TULP2O00295 520 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 CFIP05156 583 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 HMBSP08397 361 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 RPL6Q02878 288 aaKnown RBP12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 ZCWPW2Q504Y3 356 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 PEAR1Q5VY43 1037 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 LYSMD4Q5XG99 296 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 SLC23A3Q6PIS1 610 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 FAM186BQ8IYM0 893 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 CHPFQ8IZ52 775 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 SLC4A11Q8NBS3 891 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 SPACA7Q96KW9 195 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 GABRG3Q99928 467 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 DUSP16Q9BY84 665 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 NIF3L1Q9GZT8 377 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 GDPD2Q9HCC8 539 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 MARK1Q9P0L2 795 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 FBXO10Q9UK96 956 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
PRPF40B-212ENST00000551111 CACNA1GO43497 2377 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 SPAARA0A1B0GVQ0 90 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 MAPK13O15264 365 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 CEACAM1P13688 526 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 CSRP1P21291 193 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 MAOBP27338 520 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 DGKGP49619 791 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms