RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DMAP1Q9NPF5 467 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-206ENST00000543881 ZDHHC4Q9NPG8 344 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 GMIPQ9P107 970 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 CFAP97Q9P2B7 532 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 GPSM3Q9Y4H4 160 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 MYO18AQ92614 2054 aaKnown RBP12.55□□□□□ -0.4
GABPB1-206ENST00000543881 ATP8B3O60423 1300 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 TCRBV21S2A2A0A5A6 115 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 AP5Z1O43299 807 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 ADAM23O75077 832 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 SERPINF2P08697 491 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 ZDHHC11BP0C7U3 371 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 MBL2P11226 248 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-206ENST00000543881 P4HA1P13674 534 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 GCLMP48507 274 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 ZNF423Q2M1K9 1284 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 SNX30Q5VWJ9 437 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 RHBDF2Q6PJF5 856 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 RAB44Q7Z6P3 723 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-206ENST00000543881 UNC93AQ86WB7 457 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 C12orf40Q86WS4 652 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 SMYD4Q8IYR2 804 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-206ENST00000543881 MINDY1Q8N5J2 469 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 DEFB119Q8N690 84 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 KIAA1958Q8N8K9 716 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 PDZD8Q8NEN9 1154 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 WBP2Q969T9 261 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 CAPN10Q9HC96 672 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
GABPB1-206ENST00000543881 A0A0A0MRY4 1105 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 SLC9A3R1O14745 358 aaPredicted RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 KIF20AO95235 890 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 GRIA2P42262 883 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 TNFRSF4P43489 277 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 MAP3K7CLP57077 242 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 MCCD1P59942 119 aaPredicted RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 RPL6Q02878 288 aaKnown RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 KDSRQ06136 332 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 SCAPQ12770 1279 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 SOWAHCQ53LP3 525 aaPredicted RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 GPRIN1Q7Z2K8 1008 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 PDZD3Q86UT5 571 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 FAM186BQ8IYM0 893 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 OR2I1PQ8NGU4 316 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 CCDC47Q96A33 483 aaKnown RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 EEF2KMTQ96G04 330 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 ARHGEF4Q9NR80 690 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 HHLA1C9JL84 531 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 ADH1CP00326 375 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 CD59P13987 128 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 ADORA2BP29275 332 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 PSMC2P35998 433 aaKnown RBP12.53□□□□□ -0.4
GABPB1-206ENST00000543881 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 ADAM9Q13443 819 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 SLC36A4Q6YBV0 504 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 CAMK1GQ96NX5 476 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 COMMD8Q9NX08 183 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
GABPB1-206ENST00000543881 ITPR1Q14643 2758 aa12.52□□□□□ -0.4
GABPB1-206ENST00000543881 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.52□□□□□ -0.41
GABPB1-206ENST00000543881 ARHGAP33O14559 1287 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 TBX18O95935 607 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 ADH5P11766 374 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 KRT13P13646 458 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 GABRG2P18507 467 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 RPL13P26373 211 aaKnown RBP12.52□□□□□ -0.41
GABPB1-206ENST00000543881 TUBP50607 506 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 ENPEPQ07075 957 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 PNOCQ13519 176 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 TRIP6Q15654 476 aaKnown RBP12.52□□□□□ -0.41
GABPB1-206ENST00000543881 COL28A1Q2UY09 1125 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 LY6G5CQ5SRR4 150 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 CLEC20AQ6ZU45 233 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.41
GABPB1-206ENST00000543881 FMR1NBQ8N0W7 255 aaPredicted RBP12.52□□□□□ -0.41
GABPB1-206ENST00000543881 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 HNRNPABQ99729 332 aaKnown RBP12.52□□□□□ -0.41
GABPB1-206ENST00000543881 NIF3L1Q9GZT8 377 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 TMEM8AQ9HCN3 771 aa12.52□□□□□ -0.41
GABPB1-206ENST00000543881 DNAAF2Q9NVR5 837 aaKnown RBP12.52□□□□□ -0.41
GABPB1-206ENST00000543881 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 TBC1D3BA6NDS4 549 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 SH3BP5O60239 455 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 GREM1O60565 184 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 CILPO75339 1184 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 SYPP08247 313 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 FAM200BP0CF97 657 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 CD58P19256 250 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms