RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 ZNF213O14771 459 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 CCNT2O60583 730 aaKnown RBP6.67□□□□□ -1.34
LINC01088-208ENST00000511895 COQ9O75208 318 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 FGF18O76093 207 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 NDST3O95803 873 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 MYCLP12524 364 aaPredicted RBP6.67□□□□□ -1.34
LINC01088-208ENST00000511895 DENND2CQ68D51 928 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 FBXO38Q6PIJ6 1188 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 TRIM72Q6ZMU5 477 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 PTCHD4Q6ZW05 846 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 USP49Q70CQ1 688 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 METTL25Q8N6Q8 603 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 NGDNQ8NEJ9 315 aaKnown RBP6.67□□□□□ -1.34
LINC01088-208ENST00000511895 SVIPQ8NHG7 77 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 CYP2W1Q8TAV3 490 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 BRI3BPQ8WY22 251 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 SNX27Q96L92 541 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 EIF2AQ9BY44 585 aaKnown RBP6.67□□□□□ -1.34
LINC01088-208ENST00000511895 CIPCQ9C0C6 399 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 ZBTB26Q9HCK0 441 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 CHST12Q9NRB3 414 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 SNX15Q9NRS6 342 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 TMOD4Q9NZQ9 345 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 FNIP2Q9P278 1114 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 MGAT4CQ9UBM8 478 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 SLC27A6Q9Y2P4 619 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 PCDHGB2Q9Y5G2 931 aa6.67□□□□□ -1.34
LINC01088-208ENST00000511895 SUPT6HQ7KZ85 1726 aaKnown RBP6.67□□□□□ -1.34
LINC01088-208ENST00000511895 NHSL1Q5SYE7 1610 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 CCDC194A0A1B0GVG4 234 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 FGAP02671 866 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 HOXA4Q00056 320 aaPredicted RBP6.66□□□□□ -1.34
LINC01088-208ENST00000511895 PSG6Q00889 435 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 GPS1Q13098 491 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 GRM1Q13255 1194 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 SLC35G1Q2M3R5 365 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 SERPINA13PQ6UXR4 307 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 TERB1Q8NA31 727 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 ZDHHC12Q96GR4 267 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 VPS50Q96JG6 964 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.66□□□□□ -1.34
LINC01088-208ENST00000511895 NLRC4Q9NPP4 1024 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 TRIM36Q9NQ86 728 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 SERGEFQ9UGK8 458 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 VPS51Q9UID3 782 aa6.66□□□□□ -1.34
LINC01088-208ENST00000511895 MANSC4A6NHS7 340 aaPredicted RBP6.65□□□□□ -1.34
LINC01088-208ENST00000511895 M0R3H8 397 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 SPRY2O43597 315 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 BRD3Q15059 726 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 ST3GAL2Q16842 350 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 DPY19L2P1Q6NXN4 242 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 USP17L6PQ6QN14 398 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 KIRREL2Q6UWL6 708 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 ZNF788Q6ZQV5 615 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 P3H2Q8IVL5 708 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 SFTPA1Q8IWL2 248 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 CCDC28AQ8IWP9 274 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 MBD3L2Q8NHZ7 208 aaPredicted RBP6.65□□□□□ -1.34
LINC01088-208ENST00000511895 GJA10Q969M2 543 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 KIAA1191Q96A73 305 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 REPS1Q96D71 796 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 SGCZQ96LD1 299 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 MMS19Q96T76 1030 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 THAP7Q9BT49 309 aaPredicted RBP6.65□□□□□ -1.34
LINC01088-208ENST00000511895 PCDHAC1Q9H158 963 aa6.65□□□□□ -1.34
LINC01088-208ENST00000511895 ZMYND8Q9ULU4 1186 aaPredicted RBP6.65□□□□□ -1.34
LINC01088-208ENST00000511895 ZNF142P52746 1687 aaPredicted RBP6.65□□□□□ -1.35
LINC01088-208ENST00000511895 KAT6AQ92794 2004 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 FAM234BA2RU67 622 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 PODXLO00592 558 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 TMPRSS11DO60235 418 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 TMEM225BP0DP42 221 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 EEF1GP26641 437 aaKnown RBP6.64□□□□□ -1.35
LINC01088-208ENST00000511895 CD38P28907 300 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 COPB1P53618 953 aaKnown RBP6.64□□□□□ -1.35
LINC01088-208ENST00000511895 EIF4A1P60842 406 aaKnown RBP6.64□□□□□ -1.35
LINC01088-208ENST00000511895 RNASE12Q5GAN4 147 aaKnown RBP6.64□□□□□ -1.35
LINC01088-208ENST00000511895 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.64□□□□□ -1.35
LINC01088-208ENST00000511895 MRNIPQ6NTE8 343 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 DEPTORQ8TB45 409 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 ABHD5Q8WTS1 349 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 ZNF764Q96H86 408 aaPredicted RBP6.64□□□□□ -1.35
LINC01088-208ENST00000511895 WDYHV1Q96HA8 205 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 SELENOOQ9BVL4 669 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 VWDEQ8N2E2 1590 aa6.64□□□□□ -1.35
LINC01088-208ENST00000511895 RGS12O14924 1447 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 ABCB4P21439 1286 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 GABRB3P28472 473 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 DIO1P49895 249 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 RENBPP51606 427 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 PROK1P58294 105 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 LMAN2Q12907 356 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 CLCA4Q14CN2 919 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 PRAMEF17Q5VTA0 474 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 C9orf84Q5VXU9 1444 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 RAP1GAP2Q684P5 730 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 PNLDC1Q8NA58 520 aaKnown RBP6.63□□□□□ -1.35
LINC01088-208ENST00000511895 GLIS1Q8NBF1 620 aa6.63□□□□□ -1.35
LINC01088-208ENST00000511895 HASPINQ8TF76 798 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms