RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SMOC1Q9H4F8 434 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 GDPD2Q9HCC8 539 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 CISHQ9NSE2 258 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 DNAJC17Q9NVM6 304 aaKnown RBP21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 CNOT1A5YKK6 2376 aaKnown RBP21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 TPRP12270 2363 aaKnown RBP21■□□□□ 0.95
UBE2D3-220ENST00000505307 NEDD8-MDP1E9PL57 170 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 KHNYNO15037 678 aaKnown RBP21■□□□□ 0.95
UBE2D3-220ENST00000505307 ZBTB24O43167 697 aaPredicted RBP21■□□□□ 0.95
UBE2D3-220ENST00000505307 MAP3K13O43283 966 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 TYRP14679 529 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 NTSR1P30989 418 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 PRCPP42785 496 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 COG7P83436 770 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 PNOCQ13519 176 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 ZNF394Q53GI3 561 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 ARHGAP17Q68EM7 881 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 SDE2Q6IQ49 451 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 Q6ZNB5 142 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 SMYD4Q8IYR2 804 aaPredicted RBP21■□□□□ 0.95
UBE2D3-220ENST00000505307 HMGB4Q8WW32 186 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 CNTNAP3BQ96NU0 1288 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 EDEM2Q9BV94 578 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 LSM14BQ9BX40 385 aaKnown RBP21■□□□□ 0.95
UBE2D3-220ENST00000505307 CNTNAP3Q9BZ76 1288 aa21■□□□□ 0.95
UBE2D3-220ENST00000505307 HOOK1Q9UJC3 728 aaKnown RBP21■□□□□ 0.95
UBE2D3-220ENST00000505307 ABCA7Q8IZY2 2146 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 TCRBV21S2A2A0A5A6 115 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 BCKDHBP21953 392 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 DHPSP49366 369 aaPredicted RBP20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 RAD23BP54727 409 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 YWHAEP62258 255 aaKnown RBP20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 BECN1Q14457 450 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 SCD5Q86SK9 330 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 PGBD3Q8N328 593 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 SLC4A11Q8NBS3 891 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 EEF2KMTQ96G04 330 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 DCLK3Q9C098 648 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 COQ4Q9Y3A0 265 aa20.99■□□□□ 0.95
UBE2D3-220ENST00000505307 STC2O76061 302 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 CHKAP35790 457 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 NUCB2P80303 420 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 LRRC63Q05C16 580 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 MAP7D1Q3KQU3 841 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 TCERG1LQ5VWI1 586 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 DAB2IPQ5VWQ8 1189 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 TCEAL6Q6IPX3 200 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 TPGS1Q6ZTW0 290 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 ZC3H3Q8IXZ2 948 aaKnown RBP20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 ANKRD52Q8NB46 1076 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 TCEAL3Q969E4 200 aa20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 MYO18AQ92614 2054 aaKnown RBP20.98■□□□□ 0.95
UBE2D3-220ENST00000505307 HOXB2P14652 356 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 DGKGP49619 791 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 RAB41Q5JT25 222 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 SLC36A4Q6YBV0 504 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 SPATA20Q8TB22 786 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 RLN3Q8WXF3 142 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 SMARCE1Q969G3 411 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 TIGD1Q96MW7 591 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 ARMCX3Q9UH62 379 aaPredicted RBP20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 EVLQ9UI08 416 aaPredicted RBP20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 NUDT5Q9UKK9 219 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 STRIP2Q9ULQ0 834 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 CIZ1Q9ULV3 898 aaPredicted RBP20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 THADAQ6YHU6 1953 aa20.97■□□□□ 0.95
UBE2D3-220ENST00000505307 ACACBO00763 2458 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 LNP1A1A4G5 178 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 GFRA2O00451 464 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 MDM4O15151 490 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 HOXD12P35452 270 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 E2F5Q15329 346 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 DCAF17Q5H9S7 520 aaPredicted RBP20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 PIGZQ86VD9 579 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 MIB1Q86YT6 1006 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 SYT12Q8IV01 421 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 CHPFQ8IZ52 775 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 ENGASEQ8NFI3 743 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 PIGKQ92643 395 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 TATDN2Q93075 761 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 METTL14Q9HCE5 456 aaKnown RBP20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 ZDHHC4Q9NPG8 344 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 FBXO10Q9UK96 956 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 KIAA1257Q9ULG3 409 aa20.96■□□□□ 0.95
UBE2D3-220ENST00000505307 NUP205Q92621 2012 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 C4orf47A7E2U8 309 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 TRIM24O15164 1050 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 AP5Z1O43299 807 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 ZNF217O75362 1048 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 CISD3P0C7P0 127 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 GABRG2P18507 467 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 PPP1R2P41236 205 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 LMAN2Q12907 356 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 STIM1Q13586 685 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 CUL2Q13617 745 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 CBWD6Q4V339 395 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 CBWD3Q5JTY5 395 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 CBWD5Q5RIA9 395 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 EGFLAMQ63HQ2 1017 aa20.95■□□□□ 0.94
UBE2D3-220ENST00000505307 ANKRD40Q6AI12 368 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms