RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 A0A1W2PQH9 124 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 SOX1O00570 391 aaPredicted RBP13.93□□□□□ -0.18
PRDM2-213ENST00000503842 LRG1P02750 347 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 HNRNPA1P09651 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRDM2-213ENST00000503842 PDGFRAP16234 1089 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 PSMA2P25787 234 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 NOS2P35228 1153 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 PTPN9P43378 593 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 GNG11P61952 73 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 YWHAGP61981 247 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRDM2-213ENST00000503842 PIGHQ14442 188 aaPredicted RBP13.93□□□□□ -0.18
PRDM2-213ENST00000503842 CCDC14Q49A88 953 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 OTUD1Q5VV17 481 aaPredicted RBP13.93□□□□□ -0.18
PRDM2-213ENST00000503842 DAAM2Q86T65 1068 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 CPNE8Q86YQ8 564 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 SYCE1Q8N0S2 351 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 VN1R2Q8NFZ6 395 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 GOLGA1Q92805 767 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 PPP2R3CQ969Q6 453 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 NT5C3BQ969T7 300 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 SLITRK1Q96PX8 696 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 CNPY3Q9BT09 278 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 LRRC3Q9BY71 257 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 IL21Q9HBE4 155 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 ZNF334Q9HCZ1 680 aaPredicted RBP13.93□□□□□ -0.18
PRDM2-213ENST00000503842 OSER1Q9NX31 292 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 CLIC5Q9NZA1 410 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 MAGED2Q9UNF1 606 aaPredicted RBP13.93□□□□□ -0.18
PRDM2-213ENST00000503842 ALG6Q9Y672 507 aa13.93□□□□□ -0.18
PRDM2-213ENST00000503842 PRRC2BQ5JSZ5 2229 aaKnown RBP13.92□□□□□ -0.18
PRDM2-213ENST00000503842 TMEM110-MUSTN1A8MSY1 372 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 KIF2AO00139 706 aaPredicted RBP13.92□□□□□ -0.18
PRDM2-213ENST00000503842 FANCGO15287 622 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 TADA3O75528 432 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 RFPL2O75678 378 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 TUBB4AP04350 444 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 COMTP21964 271 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 SDC4P31431 198 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 GTF2F1P35269 517 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRDM2-213ENST00000503842 SLC1A1P43005 524 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 HYAL1Q12794 435 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 GRIN2CQ14957 1233 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 ACAP1Q15027 740 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 TCEAL5Q5H9L2 206 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 SNX30Q5VWJ9 437 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 SYPL2Q5VXT5 272 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 BTBD8Q5XKL5 378 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 ELMSAN1Q6PJG2 1045 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 BNIPLQ7Z465 357 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 NT5DC3Q86UY8 548 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 TMC8Q8IU68 726 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 ARFGAP1Q8N6T3 406 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 CENPIQ92674 756 aaPredicted RBP13.92□□□□□ -0.18
PRDM2-213ENST00000503842 NPY6RQ99463 290 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 PRDM12Q9H4Q4 367 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 TLR8Q9NR97 1041 aaKnown RBP13.92□□□□□ -0.18
PRDM2-213ENST00000503842 ABCC13Q9NSE7 274 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 ZDHHC7Q9NXF8 308 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 RRN3Q9NYV6 651 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 UXTQ9UBK9 157 aaPredicted RBP13.92□□□□□ -0.18
PRDM2-213ENST00000503842 NAALADL1Q9UQQ1 740 aa13.92□□□□□ -0.18
PRDM2-213ENST00000503842 DOCK6Q96HP0 2047 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 ZNF840PA6NDX5 716 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 CCL16O15467 120 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 FTCDO95954 541 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 F11P03951 625 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 NCAM1P13591 858 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 TFE3P19532 575 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 POU3F3P20264 500 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 PPP3CCP48454 512 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 EPHA5P54756 1037 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 PITX1P78337 314 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 RBM10P98175 930 aaKnown RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 TAF12Q16514 161 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 C15orf59Q2T9L4 293 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 SLC25A52Q3SY17 297 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 DCAF6Q58WW2 860 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 MSANTD2Q6P1R3 559 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 TMEM184AQ6ZMB5 413 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 TMEM150AQ86TG1 271 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 PARP9Q8IXQ6 854 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 ELMOD1Q8N336 334 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 ZNF276Q8N554 614 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 DQX1Q8TE96 717 aaKnown RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 UBE2Q2Q8WVN8 375 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 EDEM1Q92611 657 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 CASP10Q92851 521 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 CD101Q93033 1021 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 ZNF707Q96C28 371 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 ZNF512Q96ME7 567 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 CFAP57Q96MR6 1250 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 DZANK1Q9NVP4 752 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRDM2-213ENST00000503842 TRPM5Q9NZQ8 1165 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 STAP1Q9ULZ2 295 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 HYOU1Q9Y4L1 999 aa13.91□□□□□ -0.18
PRDM2-213ENST00000503842 CAPN9O14815 690 aa13.9□□□□□ -0.18
PRDM2-213ENST00000503842 LRCH4O75427 683 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms