RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 ZNF580Q9UK33 172 aa3.95□□□□□ -1.78
VPS36-205ENST00000492650 FBXO9Q9UK97 447 aaPredicted RBP3.95□□□□□ -1.78
VPS36-205ENST00000492650 NOB1Q9ULX3 412 aaKnown RBP3.95□□□□□ -1.78
VPS36-205ENST00000492650 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 FAM90A10PA6NDY2 464 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 CD8B2A6NJW9 211 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 TLR2O60603 784 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 PARP1P09874 1014 aaKnown RBP3.94□□□□□ -1.78
VPS36-205ENST00000492650 ATF7P17544 494 aaPredicted RBP3.94□□□□□ -1.78
VPS36-205ENST00000492650 CD53P19397 219 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 CCKARP32238 428 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 ME1P48163 572 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 RPS13P62277 151 aaKnown RBP3.94□□□□□ -1.78
VPS36-205ENST00000492650 HTRA4P83105 476 aaPredicted RBP3.94□□□□□ -1.78
VPS36-205ENST00000492650 CFHR3Q02985 330 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 SLC14A1Q13336 389 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 SLC29A2Q14542 456 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 CNN3Q15417 329 aaKnown RBP3.94□□□□□ -1.78
VPS36-205ENST00000492650 NPY5RQ15761 445 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 ZNF750Q32MQ0 723 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 C3orf38Q5JPI3 329 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 SWSAP1Q6NVH7 229 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 PCGF5Q86SE9 256 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 C14orf80Q86SX3 495 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 PIM3Q86V86 326 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS36-205ENST00000492650 CHPFQ8IZ52 775 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 C12orf76Q8N812 135 aaPredicted RBP3.94□□□□□ -1.78
VPS36-205ENST00000492650 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 WDYHV1Q96HA8 205 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 VPS50Q96JG6 964 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 BRIP1Q9BX63 1249 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 C22orf23Q9BZE7 217 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 TMEM60Q9H2L4 133 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 TRIM36Q9NQ86 728 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 HEY2Q9UBP5 337 aa3.94□□□□□ -1.78
VPS36-205ENST00000492650 AFF4Q9UHB7 1163 aaKnown RBP3.94□□□□□ -1.78
VPS36-205ENST00000492650 ISM1B1AKI9 464 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 FAM227AF5H4B4 570 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 FYB1O15117 783 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 SNX2O60749 519 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 CRYABP02511 175 aaKnown RBP3.93□□□□□ -1.78
VPS36-205ENST00000492650 CTSAP10619 480 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 PSG1P11464 419 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 TPH1P17752 444 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 TACR3P29371 465 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 YPEL5P62699 121 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 DEUP1Q05D60 604 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 STIM1Q13586 685 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 CNGA2Q16280 664 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 PFKFB3Q16875 520 aaPredicted RBP3.93□□□□□ -1.78
VPS36-205ENST00000492650 SLC9C1Q4G0N8 1177 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 WDR78Q5VTH9 848 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 APOA5Q6Q788 366 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 YAF2Q8IY57 180 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 FAM9BQ8IZU0 186 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 FAM71DQ8N9W8 422 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 ZNF548Q8NEK5 533 aaPredicted RBP3.93□□□□□ -1.78
VPS36-205ENST00000492650 ADAMTS15Q8TE58 950 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 NMD3Q96D46 503 aaKnown RBP3.93□□□□□ -1.78
VPS36-205ENST00000492650 GAR1Q9NY12 217 aaKnown RBP3.93□□□□□ -1.78
VPS36-205ENST00000492650 ANAPC4Q9UJX5 808 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 ITGB1BP2Q9UKP3 347 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 ASAP1Q9ULH1 1129 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 HS3ST3B1Q9Y662 390 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 CNTNAP2Q9UHC6 1331 aa3.93□□□□□ -1.78
VPS36-205ENST00000492650 CCDC187A0A096LP49 1063 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 AQP7P3A6NL99 342 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 AGPSO00116 658 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 OAZ2O95190 189 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 ALPLP05186 524 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 U2AF1L5P0DN76 240 aaPredicted RBP3.92□□□□□ -1.78
VPS36-205ENST00000492650 YY1P25490 414 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 ACVR2AP27037 513 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 NTSR1P30989 418 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 MCM5P33992 734 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 CPA2P48052 419 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 CPT1AP50416 773 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 RPS16P62249 146 aaKnown RBP3.92□□□□□ -1.78
VPS36-205ENST00000492650 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
VPS36-205ENST00000492650 U2AF1Q01081 240 aaKnown RBP eCLIP3.92□□□□□ -1.78
VPS36-205ENST00000492650 CFHR1Q03591 330 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 TMEM95Q3KNT9 176 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 LEXMQ3ZCV2 418 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 MINDY4Q4G0A6 757 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 MIDNQ504T8 468 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 C10orf62Q5T681 223 aaPredicted RBP3.92□□□□□ -1.78
VPS36-205ENST00000492650 CLEC9AQ6UXN8 241 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 KSR2Q6VAB6 950 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 DEF8Q6ZN54 512 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 COLCA1Q6ZS62 124 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 KIAA0319LQ8IZA0 1049 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 METTL25Q8N6Q8 603 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 RUNDC1Q96C34 613 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 HIC2Q96JB3 615 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 HIST1H2AAQ96QV6 131 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 DHX36Q9H2U1 1008 aaKnown RBP3.92□□□□□ -1.78
VPS36-205ENST00000492650 FAM204AQ9H8W3 233 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 STEAP1Q9UHE8 339 aa3.92□□□□□ -1.78
VPS36-205ENST00000492650 MID2Q9UJV3 735 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms