RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PRKCIP41743 596 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 MAGEA9P43362 315 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 NUBP1P53384 320 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 FMO1Q01740 532 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 RING1Q06587 406 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 NR1H3Q13133 447 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 RUNX3Q13761 415 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 EML3Q32P44 896 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 PTPN20Q4JDL3 420 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 SFMBT2Q5VUG0 894 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 SPECC1LQ69YQ0 1117 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 ZNF852Q6ZMS4 543 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 SLC26A9Q7LBE3 791 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 ARCQ7LC44 396 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 IRF2BP2Q7Z5L9 587 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 SUGP1Q8IWZ8 645 aaKnown RBP11.59□□□□□ -0.55
CPSF7-212ENST00000489728 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 ST13P5Q8NFI4 369 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-212ENST00000489728 PBXIP1Q96AQ6 731 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
CPSF7-212ENST00000489728 SYNCQ9H7C4 482 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 POPDC2Q9HBU9 364 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 SMPD4Q9NXE4 827 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 CA14Q9ULX7 337 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 BZW2Q9Y6E2 419 aaKnown RBP11.59□□□□□ -0.55
CPSF7-212ENST00000489728 PIAS3Q9Y6X2 628 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 KANSL1LA0AUZ9 987 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 GREM1O60565 184 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 STC2O76061 302 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 TBX18O95935 607 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 ADH1CP00326 375 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 CHRNB2P17787 502 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 MMP8P22894 467 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 GSCP56915 257 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-212ENST00000489728 YWHAZP63104 245 aaKnown RBP11.58□□□□□ -0.56
CPSF7-212ENST00000489728 ZBED6P86452 979 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 CENPCQ03188 943 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 MTA1Q13330 715 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-212ENST00000489728 ASIC2Q16515 512 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 TAF3Q5VWG9 929 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 ASTLQ6HA08 431 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-212ENST00000489728 OLFML1Q6UWY5 402 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 Q6ZNB5 142 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 TPRG1Q6ZUI0 275 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 HFE2Q6ZVN8 426 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 ERICH1Q86X53 443 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 MIB1Q86YT6 1006 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 RNF214Q8ND24 703 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 CLEC4CQ8WTT0 213 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 FAM149B1Q96BN6 582 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 C18orf8Q96DM3 657 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 SERPINB11Q96P15 392 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 SLC2A13Q96QE2 648 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 AGPAT1Q99943 283 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 SYT11Q9BT88 431 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 IER2Q9BTL4 223 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-212ENST00000489728 TBC1D17Q9HA65 648 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 HPS4Q9NQG7 708 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 HEBP1Q9NRV9 189 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 RRN3Q9NYV6 651 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 RASAL2Q9UJF2 1139 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 WNT6Q9Y6F9 365 aa11.58□□□□□ -0.56
CPSF7-212ENST00000489728 COL4A3Q01955 1670 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 SPECC1L-ADORA2AF8WAN1 911 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 CAPN9O14815 690 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 NCAM2O15394 837 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 DAB1O75553 588 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 IGLV3-27P01718 113 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 ERBB2P04626 1255 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 UNGP13051 313 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 NCAM1P13591 858 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 AOC1P19801 751 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 CTHP32929 405 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 EIF2DP41214 584 aaKnown RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 NSFP46459 744 aaKnown RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 HARS2P49590 506 aaKnown RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 SLC6A3Q01959 620 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 EFEMP1Q12805 493 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 CLEC16AQ2KHT3 1053 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 NAA35Q5VZE5 725 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 NUGGCQ68CJ6 796 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 CWF19L1Q69YN2 538 aaKnown RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 FAM183BPQ6ZVS7 135 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 PHF13Q86YI8 300 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 GPIHBP1Q8IV16 184 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 ADGRG2Q8IZP9 1017 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 PJA1Q8NG27 643 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 NDRG1Q92597 394 aaKnown RBP11.57□□□□□ -0.56
CPSF7-212ENST00000489728 EDEM1Q92611 657 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 ZFYVE19Q96K21 471 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 LRFN3Q9BTN0 628 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 EBF3Q9H4W6 596 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 ECT2Q9H8V3 914 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 LTB4R2Q9NPC1 389 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 GTSE1Q9NYZ3 720 aa11.57□□□□□ -0.56
CPSF7-212ENST00000489728 WDR35Q9P2L0 1181 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms