RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C12orf40Q86WS4 652 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 EDEM1Q92611 657 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 HSFY1Q96LI6 401 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 FAM126AQ9BYI3 521 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-223ENST00000475146 SEMA4AQ9H3S1 761 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 ST7Q9NRC1 585 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 OLA1Q9NTK5 396 aaKnown RBP25.17■■□□□ 1.62
CPNE1-223ENST00000475146 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-223ENST00000475146 HOXC11O43248 304 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-223ENST00000475146 TPM2P07951 284 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 TDGF1P13385 188 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 EIF2DP41214 584 aaKnown RBP25.16■■□□□ 1.62
CPNE1-223ENST00000475146 NRLP54845 237 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 KDSRQ06136 332 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 TMEM25Q86YD3 366 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 SCML4Q8N228 414 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 RPLP0P6Q8NHW5 317 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 ZNF606Q8WXB4 792 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 PNKPQ96T60 521 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 MIS12Q9H081 205 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 TMEM63CQ9P1W3 806 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 MYOFQ9NZM1 2061 aa25.16■■□□□ 1.62
CPNE1-223ENST00000475146 PIEZO1Q92508 2521 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 GABBR2O75899 941 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 PAPSS2O95340 614 aaPredicted RBP25.15■■□□□ 1.62
CPNE1-223ENST00000475146 APODP05090 189 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 GPD2P43304 727 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 SEC13P55735 322 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 CDKAL1Q5VV42 579 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 Q6ZNB5 142 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 TPGS1Q6ZTW0 290 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 NAT16Q8N8M0 369 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 ZBTB44Q8NCP5 570 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 IRGQQ8WZA9 623 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 GOLGA1Q92805 767 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 NELL1Q92832 810 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 LSM14BQ9BX40 385 aaKnown RBP25.15■■□□□ 1.62
CPNE1-223ENST00000475146 ARHGEF4Q9NR80 690 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 ABCC13Q9NSE7 274 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 FANCLQ9NW38 375 aa25.15■■□□□ 1.62
CPNE1-223ENST00000475146 ATG2BQ96BY7 2078 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 FANCMQ8IYD8 2048 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 NEDD8-MDP1E9PL57 170 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 K7ESF4 209 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 FBXO21O94952 628 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 LMNAP02545 664 aaKnown RBP25.14■■□□□ 1.62
CPNE1-223ENST00000475146 CORO1AP31146 461 aaKnown RBP25.14■■□□□ 1.62
CPNE1-223ENST00000475146 MYL5Q02045 173 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 KCNMA1Q12791 1236 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 RAPGEF1Q13905 1077 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 KRT31Q15323 416 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 MEA1Q16626 185 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 HEATR6Q6AI08 1181 aaKnown RBP25.14■■□□□ 1.62
CPNE1-223ENST00000475146 CCDC26Q8TAB7 109 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 CLEC4CQ8WTT0 213 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 BBS2Q9BXC9 721 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 DCLK3Q9C098 648 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 VPS16Q9H269 839 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 SLC8A2Q9UPR5 921 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 ZNF510Q9Y2H8 683 aa25.14■■□□□ 1.62
CPNE1-223ENST00000475146 CHURC1-FNTBB4DL54 471 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 KAT7O95251 611 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 KLKB1P03952 638 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 PNMA6AP0CW24 399 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-223ENST00000475146 ACADSBP45954 432 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 FNTBP49356 437 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 PTK2Q05397 1052 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 TYRO3Q06418 890 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 FMNL3Q8IVF7 1028 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 ACDQ96AP0 544 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 PLD4Q96BZ4 506 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 SFMBT1Q9UHJ3 866 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 FHOD1Q9Y613 1164 aa25.13■■□□□ 1.61
CPNE1-223ENST00000475146 K7EQS6 105 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 FOXN3O00409 490 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-223ENST00000475146 LTFP02788 710 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 DMWDQ09019 674 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 MESP2Q0VG99 397 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 CAVIN1Q6NZI2 390 aaKnown RBP25.12■■□□□ 1.61
CPNE1-223ENST00000475146 DENND1CQ8IV53 801 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 ETFBKMTQ8IXQ9 262 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 ANKRD20A12PQ8NF67 263 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 BHMTQ93088 406 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 POLR3BQ9NW08 1133 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-223ENST00000475146 WDR35Q9P2L0 1181 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 DEC1Q9P2X7 70 aa25.12■■□□□ 1.61
CPNE1-223ENST00000475146 SART1O43290 800 aaKnown RBP25.11■■□□□ 1.61
CPNE1-223ENST00000475146 LILRB5O75023 590 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 TULP3O75386 442 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 TYRP14679 529 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 GRIA2P42262 883 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 DRAP1Q14919 205 aaPredicted RBP25.11■■□□□ 1.61
CPNE1-223ENST00000475146 C2orf27AQ580R0 203 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 FKBP15Q5T1M5 1219 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 KLHDC7AQ5VTJ3 777 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 PASD1Q8IV76 773 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 SFTPA1Q8IWL2 248 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 SCUBE3Q8IX30 993 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 USP33Q8TEY7 942 aa25.11■■□□□ 1.61
CPNE1-223ENST00000475146 STK32AQ8WU08 396 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms