RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 EOMESO95936 686 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CYP11A1P05108 521 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 SNX16P57768 344 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FASTKD3Q14CZ7 662 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 KYNUQ16719 465 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 BOLA3Q53S33 107 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ERMARDQ5T6L9 678 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAXCQ5TGI0 409 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAM171A1Q5VUB5 890 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ANKRD22Q5VYY1 191 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAM117BQ6P1L5 589 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAM171BQ6P995 826 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.48□□□□□ -1.37
CLK1-210ENST00000473565 BHLHA9Q7RTU4 235 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 TP53INP2Q8IXH6 220 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.48□□□□□ -1.376e-7■■■■■ 27.3
CLK1-210ENST00000473565 KCTD13Q8WZ19 329 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CENPIQ92674 756 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 NKD2Q969F2 451 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 C9orf72Q96LT7 481 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 DNAI2Q9GZS0 605 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CDC42EP4Q9H3Q1 356 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 RABEP2Q9H5N1 569 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 HOMER3Q9NSC5 361 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 WHRNQ9P202 907 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 OGDHLQ9ULD0 1010 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ATP11BQ9Y2G3 1177 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 PCDHB7Q9Y5E2 793 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 PTPRDP23468 1912 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 TCRBV7S3A2A0A539 114 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 TBKBP1A7MCY6 615 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAM72CH0Y354 149 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 H7C0C1 242 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 APOC4-APOC2K7ER74 178 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 MCF2LO15068 1137 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CREB3O43889 395 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 TADA2AO75478 443 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ZBED1O96006 694 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 APOC2P02655 101 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ITIH2P19823 946 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 RPL22P35268 128 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 GRIK1P39086 918 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ATP5OP48047 213 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 SLC11A1P49279 550 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 TSPY1Q01534 308 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 IFFO1Q0D2I5 559 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAAP100Q0VG06 881 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 SLC10A2Q12908 348 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 DDR2Q16832 855 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 SLC25A52Q3SY17 297 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 KRT71Q3SY84 523 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAM72AQ5TYM5 149 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAM72DQ6L9T8 149 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 DARS2Q6PI48 645 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 TAS1R1Q7RTX1 841 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 FAM72BQ86X60 149 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CCDC89Q8N998 374 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 EPS8L3Q8TE67 593 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 BCL7CQ8WUZ0 217 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 RSAD2Q8WXG1 361 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 P3H4Q92791 437 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CASD1Q96PB1 797 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 NPY6RQ99463 290 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 PABPC3Q9H361 631 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 POPDC2Q9HBU9 364 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 TMEM161AQ9NX61 479 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CWC15Q9P013 229 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 FEZ2Q9UHY8 353 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 CHD7Q9P2D1 2997 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 NUP205Q92621 2012 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 PDE4DIPQ5VU43 2346 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 APOL1O14791 398 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 OPA1O60313 960 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 PIAS1O75925 651 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 LTFP02788 710 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ITGAVP06756 1048 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 HPDP32754 393 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 NOS2P35228 1153 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 LMAN1P49257 510 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 DEUP1Q05D60 604 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 NOMO1Q15155 1222 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 VARS2Q5ST30 1063 aaKnown RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 DENND2CQ68D51 928 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 SLC39A5Q6ZMH5 540 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 SPATA2LQ8IUW3 424 aaPredicted RBP6.48□□□□□ -1.37
CLK1-210ENST00000473565 THEM5Q8N1Q8 247 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 ATAD1Q8NBU5 361 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 SEPT8Q92599 483 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 UROC1Q96N76 676 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CSPG4P5Q96PW8 444 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CEP41Q9BYV8 373 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CYLDQ9NQC7 956 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 DDIT4Q9NX09 232 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 MARCH5Q9NX47 278 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 LRFN2Q9ULH4 789 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 PCDHB8Q9UN66 801 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
CLK1-210ENST00000473565 CDH23Q9H251 3354 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 DNALI1O14645 258 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms