RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SLC26A4O43511 780 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 CCNT2O60583 730 aaKnown RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 C1QAP02745 245 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 PTPN1P18031 435 aaKnown RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 TCN1P20061 433 aaPredicted RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 FGFR3P22607 806 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 GNA15P30679 374 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 RARRES1P49788 294 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 ITGA9Q13797 1035 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 BTG3Q14201 252 aaPredicted RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 RAB6CQ53S08 254 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 PPM1LQ5SGD2 360 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 PLEKHA7Q6IQ23 1121 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 ADGRG6Q86SQ4 1221 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 RCOR2Q8IZ40 523 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 DIS3LQ8TF46 1054 aaKnown RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 USP13Q92995 863 aaPredicted RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 DCPSQ96C86 337 aaKnown RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 PGBD4Q96DM1 585 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 PGLYRP2Q96PD5 576 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 RAB6CQ9H0N0 254 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 EPB41L1Q9H4G0 881 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 TMEM206Q9H813 350 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 APOBEC3GQ9HC16 384 aaKnown RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 C1orf112Q9NSG2 853 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 PIH1D1Q9NWS0 290 aaKnown RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 UTP6Q9NYH9 597 aaKnown RBP8.23□□□□□ -1.09
TPM3-215ENST00000469717 SIRPGQ9P1W8 387 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 PCDHB4Q9Y5E5 795 aa8.23□□□□□ -1.09
TPM3-215ENST00000469717 NFASCO94856 1347 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 E9PBE3 544 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ZBTB14O43829 449 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 KLHL41O60662 606 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ITGAVP06756 1048 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 CRKP46108 304 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 MMRN1Q13201 1228 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 STX3Q13277 289 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 KRT81Q14533 505 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 PSMD6Q15008 389 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 OGFRL1Q5TC84 451 aaPredicted RBP8.22□□□□□ -1.09
TPM3-215ENST00000469717 NCCRP1Q6ZVX7 275 aaPredicted RBP8.22□□□□□ -1.09
TPM3-215ENST00000469717 KBTBD6Q86V97 674 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 KIAA0319LQ8IZA0 1049 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 PQLC1Q8N2U9 271 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 EMC1Q8N766 993 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 IL31RAQ8NI17 732 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 PPP1R14CQ8TAE6 165 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 COA1Q9GZY4 146 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ANLNQ9NQW6 1124 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 CIDEBQ9UHD4 219 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 FAF1Q9UNN5 650 aaPredicted RBP8.22□□□□□ -1.09
TPM3-215ENST00000469717 DMTF1Q9Y222 760 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 COQ4Q9Y3A0 265 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 PPME1Q9Y570 386 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 THRAP10827 490 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 AOC1P19801 751 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ACOT2P49753 483 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 CEP55Q53EZ4 464 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 LIN9Q5TKA1 542 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 DCUN1D2Q6PH85 259 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 RNF168Q8IYW5 571 aaPredicted RBP8.22□□□□□ -1.09
TPM3-215ENST00000469717 ADGRF2Q8IZF7 708 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 NUP93Q8N1F7 819 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 MARVELD2Q8N4S9 558 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ARFGAP1Q8N6T3 406 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 NKD2Q969F2 451 aaPredicted RBP8.22□□□□□ -1.09
TPM3-215ENST00000469717 SLX1AQ9BQ83 275 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 WDR11Q9BZH6 1224 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 SEMA6AQ9H2E6 1030 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 TTLL3Q9Y4R7 772 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 E7ESA3 106 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 AIM2O14862 343 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ENTPD3O75355 529 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 FBXO21O94952 628 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 AMHP03971 560 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ECE1P42892 770 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 CTBSQ01459 385 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 CDC42EP5Q6NZY7 148 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 ELMSAN1Q6PJG2 1045 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 NR2E3Q9Y5X4 410 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 COL24A1Q17RW2 1714 aa8.22□□□□□ -1.09
TPM3-215ENST00000469717 TNRC6CQ9HCJ0 1690 aaKnown RBP8.22□□□□□ -1.09
TPM3-215ENST00000469717 RBBP6Q7Z6E9 1792 aaKnown RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 TMEM191CA6NGB0 347 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 NDC80O14777 642 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 CFLARO15519 480 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 SNNO75324 88 aaPredicted RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 FOSP01100 380 aaPredicted RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 HLA-DRAP01903 254 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 TMEM191BP0C7N4 346 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 ITGB5P18084 799 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 XRCC1P18887 633 aaPredicted RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 TNNI1P19237 187 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 ADORA2AP29274 412 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 CYP24A1Q07973 514 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 SLC10A2Q12908 348 aaPredicted RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 BRDTQ58F21 947 aaPredicted RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 ZBTB41Q5SVQ8 909 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 MAP3K21Q5TCX8 1036 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms