RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 NRDE2Q9H7Z3 1164 aa4.68□□□□□ -1.66
HMGN3P1-201ENST00000453847 CD320Q9NPF0 282 aa4.68□□□□□ -1.66
HMGN3P1-201ENST00000453847 PCDHA10Q9Y5I2 948 aa4.68□□□□□ -1.66
HMGN3P1-201ENST00000453847 PSAT1Q9Y617 370 aa4.68□□□□□ -1.66
HMGN3P1-201ENST00000453847 PRAMEF33A0A0G2JMD5 474 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 AGAP5A6NIR3 686 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 SAC3D1A6NKF1 404 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 F5H697 171 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 TOR1BO14657 336 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 TGFB1I1O43294 461 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 PRAMEF10O60809 474 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 IPO13O94829 963 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 WDR47O94967 919 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 ACP5P13686 325 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 AKR1B1P15121 316 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 EPHA3P29320 983 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 EPHA8P29322 1005 aaPredicted RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 PRKAR1BP31321 381 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 GALNSP34059 522 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 MSX2P35548 267 aaPredicted RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 ACTN2P35609 894 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 PSMC2P35998 433 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 PGM1P36871 562 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 RPS19P39019 145 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 STAT1P42224 750 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 NPTX2P47972 431 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 MCM2P49736 904 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 PDE6CP51160 858 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 AFF3P51826 1226 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 FOXL2P58012 376 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 RPL15P61313 204 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 KIAA2012Q0VF49 1180 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 TDGQ13569 410 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 KCNJ12Q14500 433 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 HLXQ14774 488 aaPredicted RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 CLCA4Q14CN2 919 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 AAK1Q2M2I8 961 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 ALDH1L2Q3SY69 923 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 DCAF17Q5H9S7 520 aaPredicted RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 UBAP2Q5T6F2 1119 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 DEPDC1Q5TB30 811 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 TTLL5Q6EMB2 1281 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 CCDC144NLQ6NUI1 221 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 C16orf89Q6UX73 402 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 KIAA1324Q6UXG2 1013 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 SYNE3Q6ZMZ3 975 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 CCDC129Q6ZRS4 1044 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 LRRC8DQ7L1W4 858 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 ARMC8Q8IUR7 673 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 SLC2A12Q8TD20 617 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 NPIPB3Q92617 1050 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 NELL1Q92832 810 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 CTHRC1Q96CG8 243 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 WDYHV1Q96HA8 205 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 PRR11Q96HE9 360 aaPredicted RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 RBM17Q96I25 401 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 MPHOSPH9Q99550 1183 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 LBHD1Q9BQE6 289 aaPredicted RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 NUDT16L1Q9BRJ7 211 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 BRF2Q9HAW0 419 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 KCNK9Q9NPC2 374 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 NSMCE4AQ9NXX6 385 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 TBC1D14Q9P2M4 693 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 DRG1Q9Y295 367 aaKnown RBP4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 NEU2Q9Y3R4 380 aa4.67□□□□□ -1.66
HMGN3P1-201ENST00000453847 FAM90A7PA6NKC0 464 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 FAM90A22PA8MWA6 464 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 FAM90A12PA8MX19 464 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 GRXCR1A8MXD5 290 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 FAM90A23PA8MXZ1 464 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 AHRRA9YTQ3 701 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 PPM1DO15297 605 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 GJB3O75712 270 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 GPANK1O95872 356 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TUBB4AP04350 444 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 C1QTNF9P0C862 333 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CHMP24386 653 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CLNS1AP54105 237 aaKnown RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SETQ01105 290 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SATB1Q01826 763 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 PTP4A2Q12974 167 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 GPR68Q15743 365 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TBCEQ15813 527 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CYP2A13Q16696 494 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TBRG1Q3YBR2 411 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 FAM69AQ5T7M9 428 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SFRP4Q6FHJ7 346 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 Q6ZRM9 215 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 Q6ZSN1 163 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 MICALCLQ6ZW33 695 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CLNKQ7Z7G1 428 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TTC30AQ86WT1 665 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 MAPKAPK5Q8IW41 473 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 FUKQ8N0W3 1084 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TMEM132CQ8N3T6 1108 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 FSTL5Q8N475 847 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SUPT20HQ8NEM7 779 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CLEC4CQ8WTT0 213 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 ATRIPQ8WXE1 791 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms