RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 FGFR1OPO95684 399 aaKnown RBP20.36■□□□□ 0.85
USP40-207ENST00000450940 CD19P15391 556 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 SEC13P55735 322 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 COG7P83436 770 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 CAMK4Q16566 473 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 TMEM270Q6UE05 265 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 CACNA2D4Q7Z3S7 1137 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.36■□□□□ 0.85
USP40-207ENST00000450940 RASSF3Q86WH2 238 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 SCML4Q8N228 414 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 PPM1KQ8N3J5 372 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 IL17RCQ8NAC3 791 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 TFAP2BQ92481 460 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 KAT5Q92993 513 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 MED15Q96RN5 788 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 WDR35Q9P2L0 1181 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 CNTN6Q9UQ52 1028 aa20.36■□□□□ 0.85
USP40-207ENST00000450940 CACNG3O60359 315 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 AFPP02771 609 aaKnown RBP20.35■□□□□ 0.85
USP40-207ENST00000450940 KLKB1P03952 638 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 SETSIPP0DME0 302 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 CCDC192P0DO97 292 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 YWHAGP61981 247 aaKnown RBP eCLIP20.35■□□□□ 0.85
USP40-207ENST00000450940 KDSRQ06136 332 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 CNGA2Q16280 664 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 CRY1Q16526 586 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 ANO4Q32M45 955 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 EMC10Q5UCC4 262 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 ERMP1Q7Z2K6 904 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 MIB1Q86YT6 1006 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 NAT16Q8N8M0 369 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 SLC35F5Q8WV83 523 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 ZSWIM1Q9BR11 485 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 ULBP1Q9BZM6 244 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 ZNF510Q9Y2H8 683 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 STARD13Q9Y3M8 1113 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 PCDHB4Q9Y5E5 795 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.35■□□□□ 0.85
USP40-207ENST00000450940 SDK1Q7Z5N4 2213 aa20.35■□□□□ 0.85
USP40-207ENST00000450940 PRR5-ARHGAP8B1AHC4 643 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 DGKEP52429 567 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 ZNF132P52740 706 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 ARHGAP8P85298 464 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 FOXK2Q01167 660 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 LMNB2Q03252 620 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 SPEM2Q0P670 501 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 STILQ15468 1287 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 TMEM92Q6UXU6 159 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 KBTBD6Q86V97 674 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 ARHGEF19Q8IW93 802 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 CCDC33Q8N5R6 958 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 ALLCQ8N6M5 410 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 TERB1Q8NA31 727 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 TSTD1Q8NFU3 115 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 UBA3Q8TBC4 463 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 DCLK3Q9C098 648 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 LRRC4Q9HBW1 653 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 MARCH2Q9P0N8 246 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 FBXO10Q9UK96 956 aa20.34■□□□□ 0.85
USP40-207ENST00000450940 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.34■□□□□ 0.85
USP40-207ENST00000450940 TBC1D3BA6NDS4 549 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 SGK1O00141 431 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 GABBR2O75899 941 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 KLF8O95600 359 aaPredicted RBP20.33■□□□□ 0.85
USP40-207ENST00000450940 TYRP14679 529 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 HNRNPLP14866 589 aaKnown RBP eCLIP20.33■□□□□ 0.85
USP40-207ENST00000450940 TIE1P35590 1138 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 EFEMP1Q12805 493 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 PUM1Q14671 1186 aaKnown RBP eCLIP20.33■□□□□ 0.85
USP40-207ENST00000450940 CSRP2Q16527 193 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 NUDT18Q6ZVK8 323 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 RRAGAQ7L523 313 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 MLKLQ8NB16 471 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 TXNDC5Q8NBS9 432 aaKnown RBP20.33■□□□□ 0.85
USP40-207ENST00000450940 CNOT6LQ96LI5 555 aaKnown RBP20.33■□□□□ 0.85
USP40-207ENST00000450940 KREMEN1Q96MU8 473 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 XPO6Q96QU8 1125 aaKnown RBP20.33■□□□□ 0.85
USP40-207ENST00000450940 BBS2Q9BXC9 721 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 CNGB3Q9NQW8 809 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 SEMA4GQ9NTN9 838 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 RASAL2Q9UJF2 1139 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 HCN2Q9UL51 889 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 USP18Q9UMW8 372 aa20.33■□□□□ 0.85
USP40-207ENST00000450940 PLXND1Q9Y4D7 1925 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 NEDD8-MDP1E9PL57 170 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 TRIM24O15164 1050 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 ADAM23O75077 832 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 EPN2O95208 641 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 CISD3P0C7P0 127 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 SDHBP21912 280 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 ADIGQ0VDE8 80 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 RSPO4Q2I0M5 234 aaPredicted RBP20.32■□□□□ 0.84
USP40-207ENST00000450940 PLK5Q496M5 336 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 EOGTQ5NDL2 527 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 GRAMD4Q6IC98 578 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 CLEC17AQ6ZS10 378 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 IRF2BP1Q8IU81 584 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 RBBP8NLQ8NC74 664 aaPredicted RBP20.32■□□□□ 0.84
USP40-207ENST00000450940 NDRG1Q92597 394 aaKnown RBP20.32■□□□□ 0.84
USP40-207ENST00000450940 P2RY11Q96G91 374 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms