RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ZSCAN30Q86W11 494 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 NRSN1Q8IZ57 195 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 GALNT15Q8N3T1 639 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 LCORLQ8N3X6 602 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 FSTL5Q8N475 847 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 EXOC6Q8TAG9 804 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 SUN3Q8TAQ9 357 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 PBKQ96KB5 322 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 WDR24Q96S15 920 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 EPS8L2Q9H6S3 715 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 STEAP1Q9UHE8 339 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 PRDM4Q9UKN5 801 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 GPR52Q9Y2T5 361 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 NLRP1Q9C000 1473 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 CFAP65Q6ZU64 1925 aaKnown RBP5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 DHX29Q7Z478 1369 aaKnown RBP5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 CEP170Q5SW79 1584 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 KAT6AQ92794 2004 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 MAST3O60307 1309 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 J3KTA2 159 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 M0R3H8 397 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 PSMD9O00233 223 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 EXOC5O00471 708 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 FCHO1O14526 889 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 NPHP1O15259 732 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 DHHO43323 396 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 ACTL6BO94805 426 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 VNN1O95497 513 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 PRKCBP05771 671 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 FESP07332 822 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 CHRM2P08172 466 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 IL6RP08887 468 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 HKR1P10072 659 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 TGM1P22735 817 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 MCM5P33992 734 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 CLCN2P51788 898 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 ARL4CP56559 192 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 TREML2Q5T2D2 321 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 SULT6B1Q6IMI4 303 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 LIN54Q6MZP7 749 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 KLHL17Q6TDP4 642 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 ANKRD18AQ8IVF6 992 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 METTL25Q8N6Q8 603 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 SUPT20HQ8NEM7 779 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 OTUD7AQ8TE49 926 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 WDR60Q8WVS4 1066 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 GCC1Q96CN9 775 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 R3HDM4Q96D70 268 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 HAPLN3Q96S86 360 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 GPR20Q99678 358 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 RTKNQ9BST9 563 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 TSPYL1Q9H0U9 437 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 NKX1-2Q9UD57 310 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 NAP1L2Q9ULW6 460 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 GAPVD1Q14C86 1478 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 SNAPC4Q5SXM2 1469 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 FHOD3Q2V2M9 1422 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 SPATA31E1Q6ZUB1 1445 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 KIAA1107Q9UPP5 1409 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 USP47Q96K76 1375 aa5.04□□□□□ -1.6
HMGB1P16-201ENST00000447155 ARHGEF11O15085 1522 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 UQCRHLA0A096LP55 91 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 PNMA6EA0A0J9YXQ4 647 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 VWC2LB2RUY7 222 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 IPO5O00410 1097 aaKnown RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 KIAA0355O15063 1070 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 IRAK2O43187 625 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 DNPH1O43598 174 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 WDR47O94967 919 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 LMNAP02545 664 aaKnown RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 UQCRHP07919 91 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 ADRB1P08588 477 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 ZFXP17010 805 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 MAKP20794 623 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 AP2B1P63010 937 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 HMGN5P82970 282 aaKnown RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 TAP1Q03518 808 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 CSHL1Q14406 222 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 ACOX1Q15067 660 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 ST3GAL2Q16842 350 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 TXNRD1Q16881 649 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 PLAC9Q5JTB6 97 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 ATPAF1Q5TC12 328 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 Q6ZNX1 250 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 CCDC117Q8IWD4 279 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 C11orf44Q8N8P7 122 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 XAGE5Q8WWM1 108 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 RFKQ969G6 155 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 COQ10AQ96MF6 247 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 FAM167BQ9BTA0 163 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 DPCDQ9BVM2 203 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 CCDC94Q9BW85 323 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 MMRN2Q9H8L6 949 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 CHMP5Q9NZZ3 219 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 DKK3Q9UBP4 350 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 GABRQQ9UN88 632 aa5.03□□□□□ -1.6
HMGB1P16-201ENST00000447155 ABCC2Q92887 1545 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM135AQ9P2D6 1515 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 A8MVJ9 347 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 CBFA2T3O75081 653 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms