RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SNX19Q92543 992 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CDH9Q9ULB4 789 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CLUHO75153 1309 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ADRB2P07550 413 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SMARCB1Q12824 385 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 EP400NLQ6ZTU2 488 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ST13P4Q8IZP2 240 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 KLC4Q9NSK0 619 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 HACD3Q9P035 362 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 WNT7AO00755 349 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 USP2O75604 605 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 URODP06132 367 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SLC12A1Q13621 1099 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 MREGQ8N565 214 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CXorf38Q8TB03 319 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SPDL1Q96EA4 605 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ASS1P00966 412 aaKnown RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 NOS2P35228 1153 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CDH18Q13634 790 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 DUSP28Q4G0W2 176 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 TMCO4Q5TGY1 634 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SH3BP5LQ7L8J4 393 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 EMILIN2Q9BXX0 1053 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 LRRC19Q9H756 370 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SUDS3Q9H7L9 328 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 TRIM45Q9H8W5 580 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 PCDHB12Q9Y5F1 795 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CFAP99D6REC4 459 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SLCO1B7G3V0H7 640 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SNUPNO95149 360 aaKnown RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CAPSQ13938 189 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SRLQ86TD4 932 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF557Q8N988 423 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 FBXO36Q8NEA4 188 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ACTL9Q8TC94 416 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ABCC13Q9NSE7 274 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SYCE1LA8MT33 242 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 DNALI1O14645 258 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 TBC1D19Q8N5T2 526 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 IL31RAQ8NI17 732 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 CLEC4DQ8WXI8 215 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 PRKD2Q9BZL6 878 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 PCDHB5Q9Y5E4 795 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 GOLGA8RI6L899 631 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 TGFB1I1O43294 461 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 IFNA8P32881 189 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SLC26A11Q86WA9 606 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 GLIS3Q8NEA6 775 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF263O14978 683 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 MYCP01106 439 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 PLA2G4AP47712 749 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 TTLL9Q3SXZ7 439 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 GRTP1Q5TC63 336 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 GANCQ8TET4 914 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 ATG4AQ8WYN0 398 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 E2F7Q96AV8 911 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SLC25A13Q9UJS0 675 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF670Q9BS34 389 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SARS2Q9NP81 518 aaKnown RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 EFR3BQ9Y2G0 817 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 GIT1Q9Y2X7 761 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 GOLGA8TH3BQL2 631 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 CAND2O75155 1236 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 KBTBD12Q3ZCT8 623 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 NTPCRQ9BSD7 190 aaKnown RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SLC30A1Q9Y6M5 507 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 A0A0B4J269 797 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 H0Y626 953 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 GRM5P41594 1212 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SRRM3A6NNA2 597 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 ANGPT2O15123 496 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 CACNB2Q08289 660 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SFSWAPQ12872 951 aaKnown RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 UGCGQ16739 394 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 CDR2LQ86X02 465 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 SLC22A9Q8IVM8 553 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF669Q96BR6 464 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 CENPTQ96BT3 561 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 ATXN7L3BQ96GX2 97 aa11.91□□□□□ -0.5
PTCH1-208ENST00000430669 DHX33Q9H6R0 707 aaKnown RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-208ENST00000430669 RPTORQ8N122 1335 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 ABHD2P08910 425 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 AASDHQ4L235 1098 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 FBXO25Q8TCJ0 367 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 CPNE1Q99829 537 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 CFLARO15519 480 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 ARL2P36404 184 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 KCNT1Q5JUK3 1230 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 DDIASQ8IXT1 998 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 PBXIP1Q96AQ6 731 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms