RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NRXN1Q9ULB1 1477 aa5.93□□□□□ -1.46
HMGB3P5-201ENST00000428894 RREB1Q92766 1687 aa5.93□□□□□ -1.46
HMGB3P5-201ENST00000428894 CEP350Q5VT06 3117 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 THSD7AQ9UPZ6 1657 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 KNDC1Q76NI1 1749 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 ABCA3Q99758 1704 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 ADAMTS3O15072 1205 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 U2AF1L5P0DN76 240 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 U2AF1Q01081 240 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 CYP1B1Q16678 543 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 KIRREL2Q6UWL6 708 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 ZDHHC24Q6UX98 284 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 DPY19L3Q6ZPD9 716 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 CHPFQ8IZ52 775 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 SPARTQ8N0X7 666 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 MAML1Q92585 1016 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 RPL36ALQ969Q0 106 aaKnown RBP5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 NAF1Q96HR8 494 aaKnown RBP5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 C5orf34Q96MH7 638 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 SNX18Q96RF0 628 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 CIPCQ9C0C6 399 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 TMEM60Q9H2L4 133 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 A1CFQ9NQ94 594 aaKnown RBP5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 BTBD3Q9Y2F9 522 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 USP19O94966 1318 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 ANKRD30BQ9BXX2 1392 aa5.92□□□□□ -1.46
HMGB3P5-201ENST00000428894 NUP188Q5SRE5 1749 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 H7C1Q1 480 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 TBX3O15119 743 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 TP73O15350 636 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 PRPF3O43395 683 aaKnown RBP5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 FPR3P25089 353 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 SUMO3P55854 103 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 KLF9Q13886 244 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 MLC1Q15049 377 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 MINDY4Q4G0A6 757 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 CERCAMQ5T4B2 595 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 MORN5Q5VZ52 161 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 C11orf87Q6NUJ2 197 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 SWSAP1Q6NVH7 229 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 SERPINA13PQ6UXR4 307 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 KIAA0319LQ8IZA0 1049 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 SIRT6Q8N6T7 355 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 SUCLG2Q96I99 432 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 RITA1Q96K30 269 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 PRR25Q96S07 402 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 SYT17Q9BSW7 474 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 C22orf23Q9BZE7 217 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 ADGRF5Q8IZF2 1346 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 PLEKHH1Q9ULM0 1364 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 IFT172Q9UG01 1749 aa5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 YTHDC2Q9H6S0 1430 aaKnown RBP5.91□□□□□ -1.46
HMGB3P5-201ENST00000428894 CFAP69A5D8W1 941 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 POC1B-GALNT4F8VUJ3 575 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 PSMD9O00233 223 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 MYCLP12524 364 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 RENBPP51606 427 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 ALDH5A1P51649 535 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 CCNIQ14094 377 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 LRRC41Q15345 812 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 CNN3Q15417 329 aaKnown RBP5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 ETFDHQ16134 617 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 FAM102BQ5T8I3 360 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 SLC2A7Q6PXP3 512 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 GALNT4Q8N4A0 578 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 TCP11L2Q8N4U5 519 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 C8orf58Q8NAV2 365 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 NGDNQ8NEJ9 315 aaKnown RBP5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 OR56A3Q8NH54 315 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 DNAJB14Q8TBM8 379 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 RSPRY1Q96DX4 576 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 XPNPEP3Q9NQH7 507 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 SACM1LQ9NTJ5 587 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 TFCP2L1Q9NZI6 479 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 CPNE7Q9UBL6 633 aa5.9□□□□□ -1.46
HMGB3P5-201ENST00000428894 CAMTA1Q9Y6Y1 1673 aa5.9□□□□□ -1.47
HMGB3P5-201ENST00000428894 EIF3AQ14152 1382 aaKnown RBP5.9□□□□□ -1.47
HMGB3P5-201ENST00000428894 ANKARQ7Z5J8 1434 aa5.9□□□□□ -1.47
HMGB3P5-201ENST00000428894 SMIM35A0A1B0GVV1 85 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 FAM227AF5H4B4 570 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 CES2O00748 559 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 PRKAR1BP31321 381 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 GKP32189 559 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 BCAT1P54687 386 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 PLEKHG6Q3KR16 790 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 CERKLQ49MI3 558 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 RNASE12Q5GAN4 147 aaKnown RBP5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 MIS18BP1Q6P0N0 1132 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 MICU3Q86XE3 530 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 GALNT16Q8N428 558 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 DENND1AQ8TEH3 1009 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 SPSB4Q96A44 273 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 PPP1R9BQ96SB3 815 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 PDGFCQ9NRA1 345 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 C1orf112Q9NSG2 853 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 STK32BQ9NY57 414 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 AMFRQ9UKV5 643 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 L1RE1Q9UN81 338 aa5.89□□□□□ -1.47
HMGB3P5-201ENST00000428894 USP22Q9UPT9 525 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 826.7 ms