RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
LRCH3-203ENST00000425562 AGO2Q9UKV8 859 aaKnown RBP13.97□□□□□ -0.17
LRCH3-203ENST00000425562 PHF24Q9UPV7 400 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 RPS6KL1Q9Y6S9 549 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 COMMD3-BMI1R4GMX3 469 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 CNTNAP2Q9UHC6 1331 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 LRCH4O75427 683 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 CPOXP36551 454 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
LRCH3-203ENST00000425562 CYTH1Q15438 398 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 NADK2Q4G0N4 442 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 SCYL2Q6P3W7 929 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 USP37Q86T82 979 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 ARHGAP18Q8N392 663 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 OXCT2Q9BYC2 517 aaPredicted RBP13.97□□□□□ -0.17
LRCH3-203ENST00000425562 XAB2Q9HCS7 855 aaKnown RBP13.97□□□□□ -0.17
LRCH3-203ENST00000425562 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 ZNF358Q9NW07 568 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 UBAP1Q9NZ09 502 aa13.97□□□□□ -0.17
LRCH3-203ENST00000425562 DRG1Q9Y295 367 aaKnown RBP13.97□□□□□ -0.17
LRCH3-203ENST00000425562 F8W8V4 182 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 VWA5AO00534 786 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 KCNN4O15554 427 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 DPEP1P16444 411 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 TPP2P29144 1249 aaPredicted RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 TNFSF9P41273 254 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 HMGCS2P54868 508 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 DNAL1Q4LDG9 190 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 NBPF12Q5TAG4 269 aaPredicted RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 EEPD1Q7L9B9 569 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 SLC26A11Q86WA9 606 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 CHSY1Q86X52 802 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 METTL25Q8N6Q8 603 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 ICA1LQ8NDH6 482 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 TMC2Q8TDI7 906 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 USP13Q92995 863 aaPredicted RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 ZNF778Q96MU6 729 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 OLFM3Q96PB7 478 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 RNPEPQ9H4A4 650 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 NEMP1O14524 444 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 AIM2O14862 343 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 MCF2LO15068 1137 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 FOXD2O60548 495 aaPredicted RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 LYPLA2O95372 231 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 TGDSO95455 350 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 CLPTM1O96005 669 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 C4BPAP04003 597 aaKnown RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 KRT3P12035 628 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 PGGT1BP53609 377 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 MYL6P60660 151 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 ACTR2P61160 394 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 MRPS22P82650 360 aaKnown RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 SP2Q02086 613 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 MAP3K10Q02779 954 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 FASTKD1Q53R41 847 aaKnown RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 C6orf52Q5T4I8 152 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 FRMD7Q6ZUT3 714 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 SH2D5Q6ZV89 423 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 PHF13Q86YI8 300 aaPredicted RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 FLAD1Q8NFF5 587 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.17
LRCH3-203ENST00000425562 ST6GALNAC4Q9H4F1 302 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 ANKEF1Q9NU02 776 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 FBXO40Q9UH90 709 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 LZTS1Q9Y250 596 aa13.96□□□□□ -0.17
LRCH3-203ENST00000425562 PLA2G6O60733 806 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 RFPL1O75677 317 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 KRT37O76014 449 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 HNRNPCP07910 306 aaKnown RBP eCLIP13.95□□□□□ -0.183e-6■■□□□ 13.9
LRCH3-203ENST00000425562 SNRPAP09012 282 aaKnown RBP13.95□□□□□ -0.18
LRCH3-203ENST00000425562 ADORA2AP29274 412 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
LRCH3-203ENST00000425562 CHN2P52757 468 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 COPAP53621 1224 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 CDH8P55286 799 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 PKNOX1P55347 436 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 SPDYAQ5MJ70 313 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 ATG16L1Q676U5 607 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 KLHDC10Q6PID8 442 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 NIM1KQ8IY84 436 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 WDTC1Q8N5D0 677 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 ERLEC1Q96DZ1 483 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 HAPLN3Q96S86 360 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 MTMR12Q9C0I1 747 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 JPH1Q9HDC5 661 aaPredicted RBP13.95□□□□□ -0.18
LRCH3-203ENST00000425562 POMPQ9Y244 141 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 ZNF711Q9Y462 761 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 KDELR1P24390 212 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 SERPINB5P36952 375 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 PSMC1P62191 440 aaKnown RBP13.95□□□□□ -0.18
LRCH3-203ENST00000425562 SLC18A2Q05940 514 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
LRCH3-203ENST00000425562 PPM1JQ5JR12 505 aa13.95□□□□□ -0.18
LRCH3-203ENST00000425562 TTC39BQ5VTQ0 682 aaPredicted RBP13.95□□□□□ -0.18
LRCH3-203ENST00000425562 CES3Q6UWW8 571 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms