RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CNTN6Q9UQ52 1028 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 SLC12A8A0AV02 714 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 PIK3R2O00459 728 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 THAP12O43422 761 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 LILRB5O75023 590 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 STC2O76061 302 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 KAT7O95251 611 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 CALCAP01258 141 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 TDGF1P13385 188 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 PON1P27169 355 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 GNA15P30679 374 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 CNR2P34972 360 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 CHKAP35790 457 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 GRIA2P42262 883 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 SLC6A11P48066 632 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 FNTBP49356 437 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 ZNF132P52740 706 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 SEC13P55735 322 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 C2orf27AQ580R0 203 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 BSPRYQ5W0U4 402 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 PMF1Q6P1K2 205 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 PKN3Q6P5Z2 889 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 GJB7Q6PEY0 223 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 TPGS1Q6ZTW0 290 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 LONP2Q86WA8 852 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 TMEM25Q86YD3 366 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 ZNF606Q8WXB4 792 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 NDRG1Q92597 394 aaKnown RBP11.74□□□□□ -0.53
RFFL-204ENST00000414419 WBP2Q969T9 261 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 SAMSN1Q9NSI8 373 aaKnown RBP11.74□□□□□ -0.53
RFFL-204ENST00000414419 ANO10Q9NW15 660 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 DEC1Q9P2X7 70 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 NFE2L3Q9Y4A8 694 aa11.74□□□□□ -0.53
RFFL-204ENST00000414419 TBC1D3BA6NDS4 549 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 YJEFN3A6XGL0 299 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 E7ENQ6 273 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 NEDD8-MDP1E9PL57 170 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 K7EQS6 105 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 K7ESF4 209 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 HOXC11O43248 304 aaPredicted RBP11.73□□□□□ -0.53
RFFL-204ENST00000414419 TULP3O75386 442 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 FBXO21O94952 628 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 EEF1GP26641 437 aaKnown RBP11.73□□□□□ -0.53
RFFL-204ENST00000414419 CORO1AP31146 461 aaKnown RBP11.73□□□□□ -0.53
RFFL-204ENST00000414419 HOXA6P31267 233 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 ACADSBP45954 432 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 HARS2P49590 506 aaKnown RBP11.73□□□□□ -0.53
RFFL-204ENST00000414419 DAOAP59103 153 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 MRPS21P82921 87 aaKnown RBP11.73□□□□□ -0.53
RFFL-204ENST00000414419 PTK2Q05397 1052 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 KDSRQ06136 332 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 EP300Q09472 2414 aaPredicted RBP11.73□□□□□ -0.53
RFFL-204ENST00000414419 GAB4Q2WGN9 574 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 SYT13Q7L8C5 426 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 C12orf40Q86WS4 652 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 SCML4Q8N228 414 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 CAMKK1Q8N5S9 505 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 ENOX1Q8TC92 643 aaKnown RBP11.73□□□□□ -0.53
RFFL-204ENST00000414419 IRGQQ8WZA9 623 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 EDEM1Q92611 657 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 RUBCNQ92622 972 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 PLD4Q96BZ4 506 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 ZSWIM1Q9BR11 485 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 MIS12Q9H081 205 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 C2orf42Q9NWW7 574 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 NCDNQ9UBB6 729 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 DNAJC12Q9UKB3 198 aa11.73□□□□□ -0.53
RFFL-204ENST00000414419 SDK1Q7Z5N4 2213 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 USP34Q70CQ2 3546 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 SART1O43290 800 aaKnown RBP11.72□□□□□ -0.53
RFFL-204ENST00000414419 GREM1O60565 184 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 CYBBP04839 570 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 TYRP14679 529 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 TIE1P35590 1138 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 GPD2P43304 727 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 TNFRSF4P43489 277 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 APBA1Q02410 837 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 SIM2Q14190 667 aaPredicted RBP11.72□□□□□ -0.53
RFFL-204ENST00000414419 DMC1Q14565 340 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 STX1AQ16623 288 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 MEA1Q16626 185 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 MIIPQ5JXC2 388 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 GRAMD4Q6IC98 578 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 Q6ZNB5 142 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 RBM43Q6ZSC3 357 aaKnown RBP11.72□□□□□ -0.53
RFFL-204ENST00000414419 CEP68Q76N32 757 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 WDR5BQ86VZ2 330 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 DENND1CQ8IV53 801 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 FMNL3Q8IVF7 1028 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 SUMF1Q8NBK3 374 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 USP33Q8TEY7 942 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 SHC3Q92529 594 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 EZH1Q92800 747 aaPredicted RBP11.72□□□□□ -0.53
RFFL-204ENST00000414419 FAM149B1Q96BN6 582 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms