RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TRIM49D1C9J1S8 452 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 PMPCBO75439 489 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 LRRN4Q8WUT4 740 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 RPRD1AQ96P16 312 aaPredicted RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 TWNKQ96RR1 684 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 G3BP2Q9UN86 482 aaKnown RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 GIT1Q9Y2X7 761 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 MYH7BA7E2Y1 1941 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 PPFIA2O75334 1257 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 FDFT1P37268 417 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 ELK3P41970 407 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 PEX5P50542 639 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 ASPHQ12797 758 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 GSDMBQ8TAX9 411 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 WNT8BQ93098 351 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 ALKBH8Q96BT7 664 aaKnown RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 ACTR5Q9H9F9 607 aaPredicted RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 RPS6KL1Q9Y6S9 549 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 TBKBP1A7MCY6 615 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 POLBP06746 335 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 PCK1P35558 622 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 MAGEA9P43362 315 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 LILRA4P59901 499 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 SLC39A12Q504Y0 691 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 PCMTD2Q9NV79 361 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 DRG1Q9Y295 367 aaKnown RBP14.52□□□□□ -0.08
SCAF4-202ENST00000399804 WDR75Q8IWA0 830 aaKnown RBP14.52□□□□□ -0.08
SCAF4-202ENST00000399804 COLGALT1Q8NBJ5 622 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 MYCBPAPQ8TBZ2 947 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 CAPNS2Q96L46 248 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 RAB3IPQ96QF0 476 aaPredicted RBP14.52□□□□□ -0.08
SCAF4-202ENST00000399804 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 PIH1D1Q9NWS0 290 aaKnown RBP14.52□□□□□ -0.08
SCAF4-202ENST00000399804 KIAA1551Q9HCM1 1747 aa14.52□□□□□ -0.08
SCAF4-202ENST00000399804 IGF2BP3O00425 579 aaKnown RBP eCLIP14.52□□□□□ -0.09
SCAF4-202ENST00000399804 GPC4O75487 556 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 ZNF189O75820 626 aaPredicted RBP14.52□□□□□ -0.09
SCAF4-202ENST00000399804 F2P00734 622 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 RPL22P35268 128 aaKnown RBP14.52□□□□□ -0.09
SCAF4-202ENST00000399804 CHKAP35790 457 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 WNT7BP56706 349 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 DPYSL3Q14195 570 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 TAF5Q15542 800 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 FAM187BQ17R55 369 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 ANO4Q32M45 955 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 LVRNQ6Q4G3 990 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 SPATA21Q7Z572 469 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 GBP7Q8N8V2 638 aaPredicted RBP14.52□□□□□ -0.09
SCAF4-202ENST00000399804 RMDN1Q96DB5 314 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 SEC16BQ96JE7 1060 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 DPEP3Q9H4B8 488 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 UBP1Q9NZI7 540 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 PPARGC1AQ9UBK2 798 aaKnown RBP14.52□□□□□ -0.09
SCAF4-202ENST00000399804 MID2Q9UJV3 735 aa14.52□□□□□ -0.09
SCAF4-202ENST00000399804 E2F8A0AVK6 867 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 HOXA2O43364 376 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 SLC2A3P11169 496 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 RPS6KA2Q15349 733 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ANKRD20A8PQ5CZ79 823 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 IL31Q6EBC2 164 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 TOP6BLQ8N6T0 577 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 NDRG1Q92597 394 aaKnown RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 LRRC37BQ96QE4 947 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 PAFAH2Q99487 392 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 CDHR5Q9HBB8 845 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 CHST12Q9NRB3 414 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 CDH9Q9ULB4 789 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 HSPA4LO95757 839 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 LMO2P25791 158 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 RPL9P32969 192 aaKnown RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ETFBP38117 255 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 DNAJC3Q13217 504 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 LRRC34Q8IZ02 419 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ZCCHC9Q8N567 271 aaKnown RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ALLCQ8N6M5 410 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 CD99L2Q8TCZ2 262 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 HTR3CQ8WXA8 447 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ART4Q93070 314 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 TACO1Q9BSH4 297 aaKnown RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 MAGEB5Q9BZ81 275 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 SIX4Q9UIU6 781 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ATP11BQ9Y2G3 1177 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 LAMB1P07942 1786 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 SCN9AQ15858 1988 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 MEFVO15553 781 aaPredicted RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 STBD1O95210 358 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 IRF1P10914 325 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 CCR1P32246 355 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ALDH1A3P47895 512 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 KPNA2P52292 529 aaKnown RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 DCAF12L1Q5VU92 463 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 TADA2BQ86TJ2 420 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 ARHGAP18Q8N392 663 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 SLC25A41Q8N5S1 370 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 PDCD7Q8N8D1 485 aaKnown RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 DDX1Q92499 740 aaKnown RBP14.51□□□□□ -0.09
SCAF4-202ENST00000399804 EXT2Q93063 718 aa14.51□□□□□ -0.09
SCAF4-202ENST00000399804 DUSP16Q9BY84 665 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms