RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CHPFQ8IZ52 775 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 IPO4Q8TEX9 1081 aaKnown RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 FOXD4L4Q8WXT5 416 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 ERLEC1Q96DZ1 483 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 GABRG3Q99928 467 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 GTPBP2Q9BX10 602 aaKnown RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 PCDHA7Q9UN72 937 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 SCML2Q9UQR0 700 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 PCDH15Q96QU1 1955 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 CEP192Q8TEP8 1941 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 ADAMTS9Q9P2N4 1935 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 CYP26A1O43174 497 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 ZNF217O75362 1048 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 ASS1P00966 412 aaKnown RBP14.55□□□□□ -0.08
CXCL12-202ENST00000374426 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
CXCL12-202ENST00000374426 FAM200BP0CF97 657 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 ADORA2BP29275 332 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 ATP5C1P36542 298 aaKnown RBP14.55□□□□□ -0.08
CXCL12-202ENST00000374426 ME1P48163 572 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 ATXN3P54252 364 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-202ENST00000374426 C1orf220Q5T0J3 134 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 OR2I1PQ8NGU4 316 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 TAF4BQ92750 862 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 P2RY11Q96G91 374 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 HSPA12BQ96MM6 686 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 XPO6Q96QU8 1125 aaKnown RBP14.55□□□□□ -0.08
CXCL12-202ENST00000374426 TWNKQ96RR1 684 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 KCTD10Q9H3F6 313 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 NMUR1Q9HB89 426 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 CD93Q9NPY3 652 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 FAM13BQ9NYF5 915 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 WDR35Q9P2L0 1181 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 KLK13Q9UKR3 277 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 CYP8B1Q9UNU6 501 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 NEUROG3Q9Y4Z2 214 aa14.55□□□□□ -0.08
CXCL12-202ENST00000374426 MYH10P35580 1976 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 CELSR3Q9NYQ7 3312 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 ARHGAP33O14559 1287 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 MDM4O15151 490 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 NR3C1P04150 777 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 CISD3P0C7P0 127 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 SLFN14P0C7P3 912 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 ACO1P21399 889 aaKnown RBP14.54□□□□□ -0.08
CXCL12-202ENST00000374426 FAM193AP78312 1265 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 GOLGA8FQ08AF8 430 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 GOLGA8DPQ0D2H9 430 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 SDE2Q6IQ49 451 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 KLHDC10Q6PID8 442 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 Q6ZNB5 142 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 RABEPKQ7Z6M1 372 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 HDDC3Q8N4P3 179 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 MINDY1Q8N5J2 469 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 TRIML1Q8N9V2 468 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 TMC2Q8TDI7 906 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 BHMTQ93088 406 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 JAKMIP2Q96AA8 810 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 MRGPRX1Q96LB2 322 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 HNRNPABQ99729 332 aaKnown RBP14.54□□□□□ -0.08
CXCL12-202ENST00000374426 BACH2Q9BYV9 841 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 SLC6A17Q9H1V8 727 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 EXOC1Q9NV70 894 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
CXCL12-202ENST00000374426 CACNA2D2Q9NY47 1150 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 SERTAD1Q9UHV2 236 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 LSM7Q9UK45 103 aaKnown RBP14.54□□□□□ -0.08
CXCL12-202ENST00000374426 NUDT5Q9UKK9 219 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 MSRB2Q9Y3D2 182 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 RAD54BQ9Y620 910 aa14.54□□□□□ -0.08
CXCL12-202ENST00000374426 A0A1W2PQD8 194 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 A0A1W2PQH9 124 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 SRRM3A6NNA2 597 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-202ENST00000374426 WASH3PC4AMC7 463 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 PDXKO00764 312 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 IKBKBO14920 756 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 ZBTB24O43167 697 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-202ENST00000374426 ACTN4O43707 911 aaKnown RBP14.53□□□□□ -0.08
CXCL12-202ENST00000374426 OPHN1O60890 802 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 HLA-DRAP01903 254 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 RARGP13631 454 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 CD59P13987 128 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 PIK3CAP42336 1068 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 DGKGP49619 791 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 INCA1Q0VD86 236 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 CEP57L1Q8IYX8 460 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 ZCCHC14Q8WYQ9 949 aaKnown RBP14.53□□□□□ -0.08
CXCL12-202ENST00000374426 PAGE5Q96GU1 130 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 ZNF419Q96HQ0 510 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-202ENST00000374426 PNPLA8Q9NP80 782 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.53□□□□□ -0.08
CXCL12-202ENST00000374426 DNAAF2Q9NVR5 837 aaKnown RBP14.53□□□□□ -0.08
CXCL12-202ENST00000374426 PLK2Q9NYY3 685 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 DNMT3LQ9UJW3 386 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 FBXO10Q9UK96 956 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 PCDHA5Q9Y5H7 936 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 KNL1Q8NG31 2342 aa14.53□□□□□ -0.08
CXCL12-202ENST00000374426 GFRA2O00451 464 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 STC2O76061 302 aa14.52□□□□□ -0.09
CXCL12-202ENST00000374426 ZSCAN22P10073 491 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms