RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 NME3Q13232 169 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 ACAP1Q15027 740 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 ELMSAN1Q6PJG2 1045 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 BEND5Q7L4P6 421 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 C12orf76Q8N812 135 aaPredicted RBP11.43□□□□□ -0.58
BRCC3-204ENST00000369462 PDZD8Q8NEN9 1154 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 VN1R2Q8NFZ6 395 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 HDAC7Q8WUI4 952 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 LRCH3Q96II8 777 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 PSMB7Q99436 277 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 CDCA3Q99618 268 aaPredicted RBP11.43□□□□□ -0.58
BRCC3-204ENST00000369462 NAPGQ99747 312 aaPredicted RBP11.43□□□□□ -0.58
BRCC3-204ENST00000369462 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRCC3-204ENST00000369462 HCFC1R1Q9NWW0 138 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 CLIC5Q9NZA1 410 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 CALCOCO1Q9P1Z2 691 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 PCSK1NQ9UHG2 260 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 CCDC195A0A1B0GUA6 201 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 ZNF840PA6NDX5 716 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 RALAP11233 206 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 HOXA9P31269 272 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 GJC1P36383 396 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 HDAC4P56524 1084 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 TAS2R40P59535 323 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 SCYL2Q6P3W7 929 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 DQX1Q8TE96 717 aaKnown RBP11.42□□□□□ -0.58
BRCC3-204ENST00000369462 OVCA2Q8WZ82 227 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 CENPIQ92674 756 aaPredicted RBP11.42□□□□□ -0.58
BRCC3-204ENST00000369462 CCSER2Q9H7U1 834 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 DDIT4Q9NX09 232 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 MTCL1Q9Y4B5 1905 aaKnown RBP11.42□□□□□ -0.58
BRCC3-204ENST00000369462 ATG2AQ2TAZ0 1938 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 TMEM265A0A087WTH1 108 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 TLR5O60602 858 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 TRUB2O95900 331 aaKnown RBP11.42□□□□□ -0.58
BRCC3-204ENST00000369462 HNRNPA1P09651 372 aaKnown RBP eCLIP11.42□□□□□ -0.58
BRCC3-204ENST00000369462 GABRR2P28476 465 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 MIPP30301 263 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 HYAL1Q12794 435 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 KCNC3Q14003 757 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 RPS6KA1Q15418 735 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 C10orf120Q5SQS8 335 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 OTUD1Q5VV17 481 aaPredicted RBP11.42□□□□□ -0.58
BRCC3-204ENST00000369462 GAREM2Q75VX8 874 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 TMEM150AQ86TG1 271 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 KIF18AQ8NI77 898 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 KRT35Q92764 455 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 CASP10Q92851 521 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 CD101Q93033 1021 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 HES6Q96HZ4 224 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 FAM204AQ9H8W3 233 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 IL21Q9HBE4 155 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 ASAH2Q9NR71 780 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 ZDHHC7Q9NXF8 308 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 RRN3Q9NYV6 651 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 SFMBT1Q9UHJ3 866 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 DOCK6Q96HP0 2047 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 MYO16Q9Y6X6 1858 aa11.42□□□□□ -0.58
BRCC3-204ENST00000369462 COL4A4P53420 1690 aaPredicted RBP11.42□□□□□ -0.58
BRCC3-204ENST00000369462 XYLBO75191 536 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 TADA3O75528 432 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 F11P03951 625 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 MARCKSL1P49006 195 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 DEUP1Q05D60 604 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 PABPC1LQ4VXU2 614 aaKnown RBP11.41□□□□□ -0.58
BRCC3-204ENST00000369462 TMC5Q6UXY8 1006 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 STRADAQ7RTN6 431 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 TAC4Q86UU9 113 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 TMC8Q8IU68 726 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 LRRC3Q9BY71 257 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 PIGVQ9NUD9 493 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 USP18Q9UMW8 372 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 MDM4O15151 490 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 MYL4P12829 197 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 PTPN2P17706 415 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 IGFBP4P22692 258 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 IL1R2P27930 398 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 CXCR5P32302 372 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 PCK1P35558 622 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 EFEMP1Q12805 493 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 ADGRE1Q14246 886 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 SNX30Q5VWJ9 437 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 TXNRD3NBQ6F5E7 133 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 FAM131BQ86XD5 332 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 MIB1Q86YT6 1006 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 ZWILCHQ9H900 591 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.41□□□□□ -0.58
BRCC3-204ENST00000369462 LMCD1Q9NZU5 365 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 DNMT3BQ9UBC3 853 aaKnown RBP11.41□□□□□ -0.58
BRCC3-204ENST00000369462 A0A1W2PRU2 124 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 CCDC66A2RUB6 948 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 MIF4GDA9UHW6 222 aaKnown RBP11.41□□□□□ -0.58
BRCC3-204ENST00000369462 LINC01565O15544 149 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
BRCC3-204ENST00000369462 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 GLP2RO95838 553 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 GJA1P17302 382 aa11.41□□□□□ -0.58
BRCC3-204ENST00000369462 RDXP35241 583 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms